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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 151ChIP-seq
Assay category
  • 151DNA binding
Target of assay
  • 151histone
  • 151histone modification
  • 78broad histone mark
  • 73narrow histone mark
  • 53control
  • 19transcription factor
  • 9RNA binding protein
  • 5nucleotide modification
Date released
  • 66August, 2017
  • 32September, 2018
  • 30October, 2018
  • 10November, 2019
  • 7October, 2019
  • 3March, 2020
  • 2May, 2021
  • 1May, 2019
Available data
  • 142bigWig
  • 137bam
  • 127bed narrowPeak
  • 100fastq
  • 49bigBed narrowPeak
  • 15tagAlign
  • 12bed bed3+
  • 12bed broadPeak
Organism
  • 145Homo sapiens
Biosample type
  • 73tissue
  • 58primary cell
  • 19cell line
  • 1in vitro differentiated cells
Organ
  • 187brain
  • 151pancreas
  • 102liver
  • 97heart
  • 93epithelium
  • 78connective tissue
  • 71vasculature
  • 70blood vessel
  • 49limb
  • 33musculature of body
  • 32adipose tissue
  • 30kidney
  • 24nerve
  • 20artery
  • 15vein
  • 12embryo
  • 6spleen
  • 4gonad
  • 4ovary
  • 3eye
  • 1blood
  • 1bodily fluid
  • 1lymph node
  • 1pituitary gland
Project
  • 147AMP
  • 4T1D
Genome assembly (visualization)
  • 142hg19
  • 136GRCh38
Lab
  • 151AMP-T2D consortium
Audit category:
  • 12inconsistent ontology term
Audit category:
  • 48missing controlled_by
Audit category:
  • 9inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

151 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans30
body of pancreas17
endocrine pancreas14
pancreas12
primary cell
pancreatic endocrine cell23
pancreatic ductal cell13
pancreatic acinar cell8
pancreatic alpha cell7
pancreatic beta cell7
cell line
EndoC_BH112
Panc17
in vitro differentiated cells
pancreatic PP cell1
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