Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 28candidate regulatory elements
  • 10chromatin state
  • 10target gene predictions
  • 7binding sites
  • 5histone modifications
  • 3accessible chromatin
Date released
  • 30September, 2022
  • 28February, 2021
  • 3June, 2020
  • 2October, 2022
Available data
  • 53bed bed3+
  • 10bed bed9
Organism
  • 63Homo sapiens
Collection Tags
  • 30EpiMap
  • 20ENCODE
  • 13ChIP-Atlas
Biosample type
  • 40primary cell
  • 15cell line
  • 6in vitro differentiated cells
  • 2tissue
Organ
  • 2914vasculature
  • 2855bodily fluid
  • 2850blood vessel
  • 2844blood
  • 2657vein
  • 902epithelium
  • 652kidney
  • 456brain
  • 456connective tissue
  • 388musculature of body
  • 304lung
  • 275intestine
  • 263pancreas
  • 250heart
  • 241limb
  • 210embryo
  • 194skin of body
  • 166large intestine
  • 164liver
  • 143extraembryonic component
  • 113stomach
  • 109eye
  • 101adipose tissue
  • 89bone element
  • 82artery
  • 82mammary gland
  • 81small intestine
  • 80uterus
  • 76prostate gland
  • 72placenta
  • 67adrenal gland
  • 64ureter
  • 63penis
  • 61lymph node
  • 48gonad
  • 48thymus
  • 43esophagus
  • 42spinal cord
  • 33spleen
  • 26testis
  • 25nerve
  • 24lymphoid tissue
  • 23lymphatic vessel
  • 21ovary
  • 21thyroid gland
  • 19mouth
  • 18skeleton
  • 15bronchus
  • 13bone marrow
  • 12breast
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 3pituitary gland
  • 1pericardium
Project
  • 63AMP
Genome assembly (visualization)
  • 63hg19
  • 10GRCh38
software_used.software.name!
  • abc
BIOSAMPLE
TYPE

63 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
binding sites
histone modifications
accessible chromatin
primary cell
foreskin keratinocyte1144
foreskin fibroblast611421
foreskin melanocyte411
cell line
EH211
EL211
ELR211
foreskin fibroblast111
in vitro differentiated cells
foreskin keratinocyte111
foreskin melanocyte111
tissue
skin of prepuce of penis11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego