Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 11target gene predictions
  • 10candidate regulatory elements
  • 10chromatin state
  • 7binding sites
  • 5histone modifications
  • 3accessible chromatin
Date released
  • 30September, 2022
  • 10February, 2021
  • 3June, 2020
  • 2October, 2022
  • 1May, 2021
Available data
  • 36bed bed3+
  • 10bed bed9
Organism
  • 46Homo sapiens
Collection Tags
  • 30EpiMap
  • 13ChIP-Atlas
  • 2ENCODE
  • 1DGA
Biosample type
  • 26primary cell
  • 12cell line
  • 6in vitro differentiated cells
  • 2tissue
Organ
  • 3345blood
  • 2876vasculature
  • 2841blood vessel
  • 2831bodily fluid
  • 2655vein
  • 900epithelium
  • 852brain
  • 672kidney
  • 478connective tissue
  • 454heart
  • 379lung
  • 308musculature of body
  • 308pancreas
  • 300intestine
  • 255skin of body
  • 231liver
  • 196limb
  • 190large intestine
  • 185embryo
  • 152eye
  • 148extraembryonic component
  • 131adipose tissue
  • 112stomach
  • 111muscle organ
  • 95bone element
  • 90mammary gland
  • 88adrenal gland
  • 88uterus
  • 84artery
  • 84placenta
  • 84thymus
  • 79small intestine
  • 73prostate gland
  • 60__MARKER__
  • 55gonad
  • 55ureter
  • 54spleen
  • 49lymph node
  • 46penis
  • 43thyroid gland
  • 41spinal cord
  • 38esophagus
  • 28ovary
  • 26testis
  • 23skeleton
  • 22nerve
  • 20lymphoid tissue
  • 19lymphatic vessel
  • 17mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 12breast
  • 12urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 46AMP
Genome assembly (visualization)
  • 46hg19
  • 10GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

46 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
binding sites
histone modifications
accessible chromatin
primary cell
foreskin keratinocyte444
foreskin fibroblast211421
foreskin melanocyte111
cell line
EH111
EL111
ELR111
foreskin fibroblast111
in vitro differentiated cells
foreskin keratinocyte111
foreskin melanocyte111
tissue
skin of prepuce of penis11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego