Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 17target gene predictions
  • 16candidate regulatory elements
  • 16chromatin state
  • 4accessible chromatin
  • 3binding sites
  • 3histone modifications
  • 1eQTL
Date released
  • 48September, 2022
  • 5February, 2021
  • 2June, 2020
  • 2November, 2021
  • 1January, 2022
  • 1May, 2021
  • 1October, 2022
Available data
  • 44bed bed3+
  • 16bed bed9
  • 2bigWig
Organism
  • 60Homo sapiens
Collection Tags
  • 48EpiMap
  • 7ChIP-Atlas
  • 2AMP
  • 2T2DKP
  • 1DGA
  • 1ENCODE
  • 1T1D
  • 1T2D
  • 1eQTLCatalogue
Biosample type
  • 48tissue
  • 9primary cell
  • 3cell line
Organ
  • 2887vasculature
  • 2837bodily fluid
  • 2828blood
  • 2828blood vessel
  • 2654vein
  • 906epithelium
  • 568kidney
  • 440connective tissue
  • 416brain
  • 302musculature of body
  • 266pancreas
  • 250lung
  • 231intestine
  • 223heart
  • 196limb
  • 185embryo
  • 163skin of body
  • 154liver
  • 138large intestine
  • 120extraembryonic component
  • 100eye
  • 91stomach
  • 88adipose tissue
  • 78bone element
  • 78uterus
  • 75artery
  • 73mammary gland
  • 66small intestine
  • 64prostate gland
  • 60placenta
  • 59adrenal gland
  • 49lymph node
  • 46penis
  • 46ureter
  • 41gonad
  • 40thymus
  • 35esophagus
  • 35spinal cord
  • 25spleen
  • 22lymphatic vessel
  • 22nerve
  • 21testis
  • 20lymphoid tissue
  • 19ovary
  • 19thyroid gland
  • 17skeleton
  • 15mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 10breast
  • 9urinary bladder
  • 8tongue
  • 8vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 58AMP
  • 2ENCODE
Genome assembly (visualization)
  • 59hg19
  • 19GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

60 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
tissue
placenta1514141121
primary cell
fibroblast of villous mesenchyme111121
placental hematopoietic stem cell1
placental villus capillary endothelial cell1
cell line
HTR-8/Svneo111
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego