Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 59candidate regulatory elements
  • 32target gene predictions
  • 27chromatin state
  • 11binding sites
  • 9histone modifications
  • 8accessible chromatin
  • 3eQTL
  • 2gene expression
  • 1variant allelic effects
Date released
  • 78September, 2022
  • 52February, 2021
  • 8November, 2021
  • 4June, 2020
  • 3January, 2022
  • 2March, 2024
  • 2May, 2021
  • 1August, 2017
  • 1February, 2024
  • 1October, 2022
Available data
  • 124bed bed3+
  • 26bed bed9
  • 4bigWig
  • 2tsv
Organism
  • 152Homo sapiens
Collection Tags
  • 78EpiMap
  • 34ENCODE
  • 23ChIP-Atlas
  • 8AMP
  • 8T2DKP
  • 3DGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2GTEx
Biosample type
  • 61primary cell
  • 58cell line
  • 25tissue
  • 8in vitro differentiated cells
Organ
  • 2918vasculature
  • 2859bodily fluid
  • 2853blood vessel
  • 2848blood
  • 2658vein
  • 961epithelium
  • 652kidney
  • connective tissue
  • 467brain
  • 397musculature of body
  • 311lung
  • 289intestine
  • 277pancreas
  • 257heart
  • 244limb
  • 215embryo
  • 204skin of body
  • 174large intestine
  • 168liver
  • 146extraembryonic component
  • 119stomach
  • 109eye
  • 104adipose tissue
  • 89bone element
  • 87mammary gland
  • 84artery
  • 84small intestine
  • 83uterus
  • 78prostate gland
  • 73adrenal gland
  • 73placenta
  • 64penis
  • 64ureter
  • 62lymph node
  • 50gonad
  • 49thymus
  • 45esophagus
  • 43spinal cord
  • 34spleen
  • 26testis
  • 25nerve
  • 24lymphatic vessel
  • 24lymphoid tissue
  • 23ovary
  • 23thyroid gland
  • 19mouth
  • 18skeleton
  • 16bronchus
  • 13bone marrow
  • 13breast
  • 13pituitary gland
  • 10tongue
  • 10urinary bladder
  • 10vagina
  • 5trachea
  • 4nose
  • 1pericardium
Project
  • 144AMP
  • 8ENCODE
Genome assembly (visualization)
  • 147hg19
  • 37GRCh38
organ_slims!
  • connective tissue
BIOSAMPLE
TYPE

152 results

search-icontable-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
accessible chromatin
eQTL
gene expression
variant allelic effects
primary cell
foreskin keratinocyte1144
keratinocyte3531221
dermis blood vessel endothelial cell622
dermis lymphatic vessel endothelial cell222
epidermal melanocyte111
cell line
RPMI79512111
SK-MEL-52111
iPS DF 19.11221
iPS DF 19.7211
iPS DF 6.9211
tissue
lower leg skin622
skin of body1113
suprapubic skin3
skin of forearm11
skin of prepuce of penis11
in vitro differentiated cells
foreskin keratinocyte111
iPS DF 4.7 Cell Line111
dermis microvascular lymphatic vessel endothelial cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego