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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 117target gene predictions
  • 35chromatin state
  • 34candidate regulatory elements
  • 32accessible chromatin
  • 18binding sites
  • 13histone modifications
  • 3eQTL
  • 2gene expression
  • 1variant allelic effects
Date released
  • 102September, 2022
  • 92July, 2026
  • 27February, 2021
  • 10November, 2021
  • 8June, 2020
  • 5May, 2021
  • 4October, 2022
  • 3January, 2022
  • 2March, 2024
  • 1August, 2017
  • 1February, 2024
Available data
  • 219bed bed3+
  • 34bed bed9
  • 5bigWig
  • 2tsv
Organism
  • 255Homo sapiens
Collection Tags
  • 102EpiMap
  • 54ENCODE-rE2G
  • 38HDMA
  • 35ChIP-Atlas
  • 10AMP
  • 10T2DKP
  • 6DGA
  • 4ENCODE
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
  • 2GTEx
Biosample type
  • 150primary cell
  • 73cell line
  • 23tissue
  • 9in vitro differentiated cells
Organ
  • 3345blood
  • 2876vasculature
  • 2841blood vessel
  • 2831bodily fluid
  • 2655vein
  • 900epithelium
  • 852brain
  • 672kidney
  • 478connective tissue
  • 454heart
  • 379lung
  • 308musculature of body
  • 308pancreas
  • 300intestine
  • 255skin of body
  • 231liver
  • 196limb
  • 190large intestine
  • 185embryo
  • 152eye
  • 148extraembryonic component
  • 131adipose tissue
  • 112stomach
  • 111muscle organ
  • 95bone element
  • 90mammary gland
  • 88adrenal gland
  • 88uterus
  • 84artery
  • 84placenta
  • 84thymus
  • 79small intestine
  • 73prostate gland
  • 60__MARKER__
  • 55gonad
  • 55ureter
  • 54spleen
  • 49lymph node
  • 46penis
  • 43thyroid gland
  • 41spinal cord
  • 38esophagus
  • 28ovary
  • 26testis
  • 23skeleton
  • 22nerve
  • 20lymphoid tissue
  • 19lymphatic vessel
  • 17mouth
  • 14bronchus
  • 13pituitary gland
  • 12bone marrow
  • 12breast
  • 12urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 245AMP
  • 10ENCODE
Genome assembly (visualization)
  • 158hg19
  • 139GRCh38
software_used.software.name!
  • encode-ccres
BIOSAMPLE
TYPE

255 results

search-icontable-tab-icon
Clear Filters
target gene predictions
chromatin state
candidate regulatory elements
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
variant allelic effects
primary cell
keratinocyte9324121
foreskin fibroblast611142
foreskin keratinocyte644
fibroblast66
fibroblast of dermis5331
cell line
GM23248111111
RPMI79512111
SK-MEL-52111
COLO829211
iPS DF 19.11211
tissue
lower leg skin422
skin of body2113
skin of forearm11
skin of prepuce of penis11
suprapubic skin2
in vitro differentiated cells
foreskin keratinocyte111
iPS DF 4.7 Cell Line111
dermis microvascular lymphatic vessel endothelial cell11
skin fibroblast1
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