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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
DNase-seq
16
ChIP-seq
2
WGBS
1
ATAC-seq
1
pCHi-C
Assay category
20
DNA accessibility
16
DNA binding
2
DNA methylation
Target of assay
8
control
6
histone
6
histone modification
6
transcription factor
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
18
June, 2019
9
November, 2018
7
December, 2018
3
January, 2019
1
March, 2020
1
October, 2017
Available data
38
bam
30
bigWig
28
bed narrowPeak
27
bigBed narrowPeak
20
fastq
19
bed bed3+
19
bed broadPeak
19
bigBed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
tsv
Organism
39
Homo sapiens
Biosample type
39
tissue
Organ
868
pancreas
726
liver
638
connective tissue
479
epithelium
471
adipose tissue
339
kidney
336
heart
216
brain
191
vasculature
185
blood vessel
159
bone element
127
artery
88
limb
76
musculature of body
61
eye
59
blood
59
bodily fluid
33
embryo
27
nerve
21
spleen
20
lung
18
ureter
16
skeleton
13
vein
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
30
GRCh38
28
hg19
Lab
39
AMP-T2D consortium
target.investigated_as!
broad histone mark
chromatin remodeller
BIOSAMPLE
ASSAY
39 results
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DNase-seq
ChIP-seq
WGBS
ATAC-seq
pCHi-C
tissue
spleen
1
16
2
1
1
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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