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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
20
DNase-seq
17
ChIP-seq
2
Hi-C
1
FAIRE-seq
Assay category
21
DNA accessibility
17
DNA binding
2
3D chromatin structure
Target of assay
15
histone
15
histone modification
9
broad histone mark
6
narrow histone mark
2
control
Date released
21
October, 2019
18
June, 2019
1
March, 2020
Available data
38
bam
33
bigWig
31
bed narrowPeak
31
bigBed narrowPeak
22
bed broadPeak
22
bigBed broadPeak
20
bed bed3+
2
hic
1
bedpe bed3+
1
tar
Organism
40
Homo sapiens
Biosample type
22
primary cell
18
tissue
Organ
946
pancreas
709
liver
684
connective tissue
524
epithelium
491
adipose tissue
393
heart
347
kidney
286
brain
236
vasculature
230
blood vessel
159
bone element
141
artery
122
limb
96
musculature of body
69
blood
69
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
bone marrow
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
40
AMP
Genome assembly (visualization)
35
hg19
30
GRCh38
Lab
40
AMP-T2D consortium
Audit category:
1
audit script error
organ_slims!
bone marrow
esophagus
target.investigated_as!
recombinant protein
BIOSAMPLE
ASSAY
40 results
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Clear Filters
DNase-seq
ChIP-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein
2
17
2
1
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
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