Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2635pQTL
  • 36accessible chromatin
  • 33chromatin state
  • 26candidate regulatory elements
  • 21binding sites
  • 15differential activity
  • 15variant allelic effects
  • 9Fine-mapped variants
  • 8histone modifications
  • 7target gene predictions
  • 6eQTL
  • 5gene expression
  • 3caQTL
Date released
  • 2635February, 2025
  • 45February, 2021
  • 27September, 2022
  • 16February, 2024
  • 15May, 2020
  • 14January, 2020
  • 14September, 2023
  • 12March, 2020
  • 6June, 2020
  • 6November, 2021
  • 4February, 2023
  • 4October, 2022
  • 3April, 2020
  • 3February, 2020
  • 3January, 2022
  • 3May, 2021
  • 3November, 2019
  • 2March, 2026
  • 2October, 2019
  • 1August, 2017
  • 1May, 2019
Available data
  • 2665tsv
  • 118bed bed3+
  • 32bed bed9
  • 31bigWig
  • 8bigBed bed9
  • 2txt
Organism
  • 2819Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 35DGA
  • 32ENCODE
  • 24ChIP-Atlas
  • 24EpiMap
  • 14KPMP
  • 12GTEx
  • 9AMP
  • 6T2DKP
  • 4CMDGA
  • 3T1D
  • 3T2D
  • 3eQTLCatalogue
Biosample type
  • 2695tissue
  • 112primary cell
  • 10cell line
  • 2in vitro differentiated cells
Organ
  • 3318blood
  • 2819vasculature
  • 2801bodily fluid
  • 2799blood vessel
  • 2654vein
  • 764brain
  • 585epithelium
  • 404kidney
  • 395heart
  • 383connective tissue
  • 299lung
  • 245intestine
  • 239musculature of body
  • 226skin of body
  • 213pancreas
  • 193liver
  • 158large intestine
  • 151embryo
  • 147limb
  • 142eye
  • 113adipose tissue
  • 111muscle organ
  • 108extraembryonic component
  • 92stomach
  • 83uterus
  • 76mammary gland
  • 73adrenal gland
  • 72bone element
  • 71thymus
  • 68artery
  • 65placenta
  • 60__MARKER__
  • 60prostate gland
  • 59small intestine
  • 50spleen
  • 47ureter
  • 46gonad
  • 46lymph node
  • 44penis
  • 38thyroid gland
  • 32esophagus
  • 32spinal cord
  • 23ovary
  • 22testis
  • 17nerve
  • 16skeleton
  • 14lymphatic vessel
  • 13lymphoid tissue
  • 12bronchus
  • 12mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 2nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 2794AMP
  • 14KPMP
  • 6ENCODE
  • 3LungMap
  • 2community
Genome assembly (visualization)
  • 156hg19
  • 87GRCh38
software_used.software.name!
  • r
BIOSAMPLE
TYPE

2819 results

search-icontable-tab-icon
Clear Filters
pQTL
accessible chromatin
chromatin state
candidate regulatory elements
binding sites
differential activity
variant allelic effects
Fine-mapped variants
histone modifications
target gene predictions
eQTL
gene expression
caQTL
tissue
whole blood2635
coronary artery33123121
tibial artery331232
ascending aorta132131
aorta422
primary cell
endothelial cell of hepatic sinusoid664
endothelial cell of umbilical vein254212
dermis blood vessel endothelial cell24
fibroblast of pulmonary artery11121
cardiac fibroblast32
cell line
choroid plexus epithelial cell111
smooth muscle cell of the coronary artery111
dermis lymphatic vessel endothelial cell11
vein endothelial cell11
in vitro differentiated cells
dermis microvascular lymphatic vessel endothelial cell11
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2026 Regents of the University of California.

  • UC San Diego