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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 16ChIP-seq
  • 1DNase-seq
  • 1FAIRE-seq
  • 1Hi-C
Assay category
  • 16DNA binding
  • 2DNA accessibility
  • 13D chromatin structure
Target of assay
  • 15histone
  • 15histone modification
  • 9broad histone mark
  • 6narrow histone mark
  • 1control
Date released
  • 18October, 2019
  • 1March, 2020
Available data
  • 18bam
  • 14bigWig
  • 12bed narrowPeak
  • 12bigBed narrowPeak
  • 3bed broadPeak
  • 3bigBed broadPeak
  • 1bed bed3+
  • 1bedpe bed3+
  • 1hic
  • 1tar
Organism
  • 19Homo sapiens
Biosample type
  • 19primary cell
Organ
  • 426liver
  • 201pancreas
  • 169epithelium
  • 96brain
  • 68connective tissue
  • 58blood
  • 58bodily fluid
  • 58kidney
  • 49vasculature
  • 44blood vessel
  • 41heart
  • 22musculature of body
  • 19vein
  • 17adipose tissue
  • 13embryo
  • 11artery
  • 9bone element
  • 8limb
  • 8skeleton
  • 7eye
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1lung
  • 1mammary gland
  • 1nerve
  • 1ovary
  • 1pituitary gland
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 19AMP
Genome assembly (visualization)
  • 15hg19
  • 11GRCh38
Lab
  • 19AMP-T2D consortium
replication_type!
  • unreplicated
BIOSAMPLE
ASSAY

19 results

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ChIP-seq
DNase-seq
FAIRE-seq
Hi-C
primary cell
endothelial cell of umbilical vein16111
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