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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 11ChIP-seq
  • 2DNase-seq
  • 2Hi-C
  • 1FAIRE-seq
Assay category
  • 11DNA binding
  • 3DNA accessibility
  • 23D chromatin structure
Target of assay
  • 15histone
  • 15histone modification
  • 9broad histone mark
  • narrow histone mark
  • 2control
Date released
  • 15October, 2019
  • 1March, 2020
Available data
  • 14bam
  • 10bigWig
  • 8bed narrowPeak
  • 8bigBed narrowPeak
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 2bed bed3+
  • 2hic
  • 1bedpe bed3+
  • 1tar
Organism
  • 16Homo sapiens
Biosample type
  • 16primary cell
Organ
  • 873pancreas
  • 731liver
  • 651connective tissue
  • 479adipose tissue
  • 475epithelium
  • 353heart
  • 339kidney
  • 210vasculature
  • 205blood vessel
  • 169brain
  • 159bone element
  • 135artery
  • 107limb
  • 84musculature of body
  • 68blood
  • 68bodily fluid
  • 58eye
  • 35nerve
  • 29embryo
  • 23spleen
  • 20lung
  • 18ureter
  • 16skeleton
  • 16vein
  • 2intestine
  • 2pericardium
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1gonad
  • 1large intestine
  • 1mammary gland
  • 1ovary
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 16AMP
Genome assembly (visualization)
  • 12hg19
  • 7GRCh38
Lab
  • 16AMP-T2D consortium
Audit category:
  • 1audit script error
target.investigated_as!
  • narrow histone mark
BIOSAMPLE
ASSAY

16 results

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Clear Filters
ChIP-seq
DNase-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein11221
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