Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17ChIP-seq
  • 2DNase-seq
  • 2Hi-C
  • 1FAIRE-seq
Assay category
  • 17DNA binding
  • 3DNA accessibility
  • 23D chromatin structure
Target of assay
  • 15histone
  • 15histone modification
  • 9broad histone mark
  • 6narrow histone mark
  • 2control
Date released
  • 21October, 2019
  • 1March, 2020
Available data
  • 20bam
  • 15bigWig
  • 13bed narrowPeak
  • 13bigBed narrowPeak
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 2bed bed3+
  • 2hic
  • 1bedpe bed3+
  • 1tar
Organism
  • 22Homo sapiens
Biosample type
  • 22primary cell
Organ
  • 946pancreas
  • 791liver
  • 684connective tissue
  • 524epithelium
  • 491adipose tissue
  • 393heart
  • 354kidney
  • 286brain
  • 236vasculature
  • 230blood vessel
  • 159bone element
  • 141artery
  • 122limb
  • 96musculature of body
  • 69blood
  • 69bodily fluid
  • 61eye
  • 43nerve
  • 37embryo
  • 25spleen
  • 22vein
  • 20lung
  • 18ureter
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 22AMP
Genome assembly (visualization)
  • 17hg19
  • 12GRCh38
Lab
  • 22AMP-T2D consortium
Audit category:
  • 1audit script error
BIOSAMPLE
ASSAY

22 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
DNase-seq
Hi-C
FAIRE-seq
primary cell
endothelial cell of umbilical vein17221
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego