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Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
45
total RNA-seq
6
MeRIP-seq
4
STARR-seq
3
single cell RNA-seq
Assay category
48
Transcription
Target of assay
3
control
3
nucleotide modification
Date released
18
February, 2021
12
August, 2021
9
October, 2019
7
December, 2019
6
November, 2020
5
March, 2020
1
July, 2018
Available data
48
tsv
46
bam
46
bigWig
1
fastq
Organism
58
Homo sapiens
Biosample type
25
cell line
24
in vitro differentiated cells
6
primary cell
3
tissue
Organ
14
epithelium
8
embryo
8
liver
8
pancreas
6
kidney
1
brain
1
heart
Project
56
AMP
2
T1D
Genome assembly (visualization)
46
GRCh38
46
hg19
Lab
48
AMP-T2D consortium
6
Rohit N. Kulkarni, M.D., Ph.D.
4
Bing Ren, UCSD
Audit category:
35
inconsistent ontology term
2
audit script error
replicates.library.nucleic_acid_term_name!
DNA
BIOSAMPLE
ASSAY
58 results
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total RNA-seq
MeRIP-seq
STARR-seq
single cell RNA-seq
cell line
EndoC_BH1
2
6
H1-hESC
8
HEK293T
2
HepG2
2
RCC 7860 HIF1a re-expression
1
+ See 4 more…
in vitro differentiated cells
cardiac precursors (cardiac muscle cell)
19
cardiomyocytes (cardiac muscle cell)
2
2
lymphocyte of B lineage (iPSC)
1
primary cell
hepatocyte
5
pancreatic cell
1
tissue
brain
1
heart
1
liver
1
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