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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 136total RNA-seq
  • 89single cell RNA-seq
  • 11small RNA-seq
  • 4MeRIP-seq
  • 2snDrop-seq
Assay category
  • 236Transcription
Target of assay
  • 2control
  • 2nucleotide modification
Date released
  • 64May, 2021
  • 44July, 2018
  • 39April, 2018
  • 25February, 2020
  • 22July, 2019
  • 13February, 2023
  • 8August, 2021
  • 8February, 2021
  • 4November, 2020
  • 3August, 2018
  • 3March, 2020
  • 3October, 2019
  • 2May, 2020
  • 1February, 2018
  • 1June, 2018
  • 1May, 2022
  • 1September, 2018
Available data
  • 212tsv
  • 184bam
  • 184bigWig
  • 86fastq
  • 4txt
  • 2csv
Organism
  • 242Homo sapiens
Biosample type
  • 111primary cell
  • 83tissue
  • 48in vitro differentiated cells
Organ
  • 86pancreas
  • 64epithelium
  • 20brain
  • 16connective tissue
  • 10heart
  • 8adipose tissue
  • 6kidney
  • 6musculature of body
  • 4bone element
  • 4liver
  • 4skeleton
  • 3blood vessel
  • 3limb
  • 3vasculature
  • 2artery
  • 2embryo
  • 1eye
  • 1nerve
  • 1spinal cord
Project
  • 212AMP
  • 30T1D
Genome assembly (visualization)
  • 184GRCh38
  • 184hg19
Lab
  • 204AMP-T2D consortium
  • 33Kyle Gaulton, UCSD
  • 4Rohit N. Kulkarni, M.D., Ph.D.
  • 1Bing Ren, UCSD
Audit category:
  • 24inconsistent ontology term
BIOSAMPLE
ASSAY

242 results

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Clear Filters
total RNA-seq
single cell RNA-seq
small RNA-seq
MeRIP-seq
snDrop-seq
primary cell
monocyte24
pancreatic alpha cell11
pancreatic beta cell11
pancreatic delta cell10
pancreatic ductal cell9
tissue
islet of Langerhans1064
heart211
frontal cortex21
liver21
skeletal muscle tissue111
in vitro differentiated cells
cardiomyocytes12
induced pluripotent stem cell9
neural progenitor cell7
embryonic stem cell5
adipocyte1
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