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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 1278total RNA-seq
  • 274single cell RNA-seq
  • 86RNA microarray
  • 7small RNA-seq
  • 1STARR-seq
  • 1snDrop-seq
Assay category
  • 1559Transcription
Date released
  • 623February, 2021
  • 165August, 2021
  • 143May, 2020
  • 123July, 2018
  • 118May, 2021
  • 89August, 2017
  • 81February, 2023
  • 59May, 2022
  • 56September, 2020
  • 47September, 2023
  • 27July, 2019
  • 26September, 2018
  • 20November, 2019
  • 14February, 2018
  • 14October, 2019
  • 10April, 2018
  • 9April, 2020
  • 7March, 2020
  • 4May, 2023
  • 4November, 2020
  • 3December, 2019
  • 2June, 2018
  • 2October, 2018
  • 1November, 2018
Available data
  • 1218tsv
  • 1105bam
  • 1101bigWig
  • 279fastq
  • 152txt
  • 52zippedFastqFolder
  • 6csv
  • 2bed bed3+
Organism
  • 1647Homo sapiens
Biosample type
  • 1230tissue
  • 257primary cell
  • 94cell line
  • 66in vitro differentiated cells
Organ
  • 459connective tissue
  • 395pancreas
  • 392adipose tissue
  • 178liver
  • 151heart
  • 142bone element
  • 125epithelium
  • 116kidney
  • 62blood vessel
  • 62vasculature
  • 54artery
  • 18eye
  • 9lung
  • 4embryo
  • 2musculature of body
Project
  • 1386AMP
  • 177HPAP
  • 47KPMP
  • 28T1D
  • 9LungMap
Genome assembly (visualization)
  • 1102hg19
  • 1100GRCh38
Lab
  • 1287AMP-T2D consortium
  • 177Klaus Kaestner, Upenn
  • 60Katalin Susztak, Upenn
  • 47KPMP
  • 37Kyle Gaulton, UCSD
  • 20Karen Mohlke, UNC
  • 10Bing Ren, UCSD
  • 9Xin Sun, UCSD
Audit category:
  • 167inconsistent ontology term
  • 7audit script error
BIOSAMPLE
ASSAY

1647 results

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Clear Filters
total RNA-seq
single cell RNA-seq
RNA microarray
small RNA-seq
STARR-seq
snDrop-seq
tissue
adipose tissue382
islet of Langerhans282
liver1641
kidney4964
bone element84
primary cell
Langerhans cell85
pancreatic alpha cell521
exocrine cell39
monocyte28
pancreatic beta cell211
cell line
smooth muscle cell of the coronary artery52
EndoC_BH131
HepG29
Synthesized DNA1
early embryonic cell1
in vitro differentiated cells
cardiomyocytes47
adipocyte4
pancreatic endoderm4
definitive endodermal cell2
embryonic stem cell2
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