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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 105ChIP-seq
Assay category
  • 105DNA binding
Target of assay
  • 884histone modification
  • 883histone
  • 481transcription factor
  • 458broad histone mark
  • 424narrow histone mark
  • 326control
  • 105RNA binding protein
  • 89recombinant protein
  • 36chromatin remodeller
  • 5other context
  • 5other post-translational modification
  • 3nucleotide modification
Date released
  • 37November, 2017
  • 21November, 2018
  • 10October, 2018
  • 7August, 2017
  • 6January, 2019
  • 5May, 2019
  • 5May, 2024
  • 4June, 2019
  • 3April, 2019
  • 3December, 2017
  • 2December, 2018
  • 1August, 2021
  • 1November, 2019
Available data
  • 103bed narrowPeak
  • 103bigWig
  • 99bam
  • 91bigBed narrowPeak
  • 86fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 1bed bed3+
  • 1tar
Organism
  • 105Homo sapiens
Biosample type
  • 65cell line
  • 24tissue
  • 10primary cell
  • 6in vitro differentiated cells
Organ
  • 57liver
  • 11heart
  • 10blood
  • 10bodily fluid
  • 10connective tissue
  • 8epithelium
  • 7pancreas
  • 5adipose tissue
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 2kidney
  • 1artery
  • 1eye
Project
  • 105AMP
Genome assembly (visualization)
  • 97GRCh38
  • 97hg19
Lab
  • 99AMP-T2D consortium
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

105 results

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Clear Filters
ChIP-seq
cell line
HepG254
GM1287810
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
subcutaneous adipose tissue2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
in vitro differentiated cells
adipocyte4
hepatocyte2
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