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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 481ChIP-seq
Assay category
  • 481DNA binding
Target of assay
  • 884histone modification
  • 883histone
  • 481transcription factor
  • 458broad histone mark
  • 424narrow histone mark
  • 326control
  • 105RNA binding protein
  • 89recombinant protein
  • 36chromatin remodeller
  • 5other context
  • 5other post-translational modification
  • 3nucleotide modification
Date released
  • 244November, 2017
  • 64November, 2018
  • 40December, 2017
  • 29August, 2017
  • 28December, 2018
  • 14January, 2019
  • 14October, 2018
  • 11August, 2021
  • 7October, 2019
  • 5April, 2019
  • 5February, 2021
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4June, 2019
  • 1November, 2019
Available data
  • 475bigWig
  • 463bam
  • 458bed narrowPeak
  • 433fastq
  • 402bigBed narrowPeak
  • 49bed broadPeak
  • 49bigBed broadPeak
  • 9tagAlign
  • 3tar
  • 1bed bed3+
Organism
  • 481Homo sapiens
Biosample type
  • 361cell line
  • 78tissue
  • 32in vitro differentiated cells
  • 10primary cell
Organ
  • 334liver
  • 51blood
  • 51bodily fluid
  • 30connective tissue
  • 17heart
  • 13adipose tissue
  • 12pancreas
  • 9epithelium
  • 9kidney
  • 9vasculature
  • 8blood vessel
  • 6spleen
  • 5artery
  • 3brain
  • 3embryo
  • 1eye
Project
  • 481AMP
Genome assembly (visualization)
  • 466hg19
  • 427GRCh38
Lab
  • 464AMP-T2D consortium
  • 11Bing Ren, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Kyle Gaulton, UCSD
Audit category:
  • 28inconsistent control
  • 14inconsistent ontology term
Audit category:
  • 25missing controlled_by
Audit category:
  • 21inconsistent control read length
  • 8inconsistent control run_type
replication_type!
  • anisogenic
BIOSAMPLE
ASSAY

481 results

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Clear Filters
ChIP-seq
cell line
HepG2297
GM1287851
smooth muscle cell of the coronary artery4
RCC 7860 HIF1a re-expression3
RCC 7860 HIF2a over-expression2
tissue
liver33
body of pancreas9
white adipose tissue8
spleen6
heart left ventricle5
in vitro differentiated cells
adipocyte16
cardiomyocytes3
pancreatic endoderm3
Posterior foregut2
definitive endodermal cell2
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
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