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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 41ChIP-seq
Assay category
  • 41DNA binding
Target of assay
  • 889histone modification
  • 888histone
  • 451narrow histone mark
  • 436broad histone mark
  • 283control
  • 127transcription factor
  • 41RNA binding protein
  • 4chromatin remodeller
  • 3other context
  • 3other post-translational modification
  • 2nucleotide modification
  • 1recombinant protein
Date released
  • 11October, 2018
  • 6August, 2017
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4May, 2019
  • 2December, 2017
  • 1August, 2021
  • 1June, 2019
  • 1November, 2018
  • 1November, 2019
Available data
  • 35bigWig
  • 34bed narrowPeak
  • 30bam
  • 22bigBed narrowPeak
  • 20fastq
  • 2bed bed3+
Organism
  • 41Homo sapiens
Biosample type
  • 28tissue
  • 9in vitro differentiated cells
  • 3cell line
  • 1primary cell
Organ
  • 11heart
  • 10connective tissue
  • 9pancreas
  • 5adipose tissue
  • 3blood vessel
  • 3liver
  • 3vasculature
  • 1artery
  • 1blood
  • 1bodily fluid
  • 1epithelium
  • 1kidney
Project
  • 41AMP
Genome assembly (visualization)
  • 34GRCh38
  • 30hg19
Lab
  • 30AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 1missing controlled_by
replication_type!
  • isogenic
BIOSAMPLE
ASSAY

41 results

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Clear Filters
ChIP-seq
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
cell line
EndoC_BH11
GM128781
HepG21
primary cell
cardiac fibroblast1
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