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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
ChIP-seq
Assay category
32
DNA binding
Target of assay
420
transcription factor
261
histone
261
histone modification
153
narrow histone mark
108
broad histone mark
88
recombinant protein
82
RNA binding protein
77
control
32
chromatin remodeller
5
nucleotide modification
2
other context
2
other post-translational modification
Date released
15
November, 2017
6
January, 2019
5
November, 2018
3
December, 2017
2
December, 2018
1
August, 2017
Available data
32
bam
32
bed narrowPeak
32
bigBed narrowPeak
32
bigWig
32
fastq
5
bed broadPeak
5
bigBed broadPeak
Organism
32
Homo sapiens
Biosample type
28
cell line
2
tissue
1
in vitro differentiated cells
1
primary cell
Organ
23
liver
8
blood
8
bodily fluid
1
epithelium
Project
32
AMP
Genome assembly (visualization)
32
hg19
30
GRCh38
Lab
32
AMP-T2D consortium
Audit category:
3
inconsistent control
Audit category:
6
missing controlled_by
Audit category:
11
inconsistent control read length
8
inconsistent control run_type
replication_type!
unreplicated
BIOSAMPLE
ASSAY
32 results
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ChIP-seq
cell line
HepG2
20
GM12878
8
tissue
liver
2
in vitro differentiated cells
hepatocyte
1
primary cell
skeletal muscle myoblast
1
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