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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 133ChIP-seq
Assay category
  • 133DNA binding
Target of assay
  • 133histone
  • 133histone modification
  • 90narrow histone mark
  • 43broad histone mark
  • 33transcription factor
  • 17control
  • 9RNA binding protein
  • 2nucleotide modification
Date released
  • 50May, 2021
  • 41October, 2019
  • 17August, 2021
  • 12August, 2017
  • 6June, 2019
  • 5October, 2017
  • 2March, 2020
Available data
  • 122bam
  • 122bigWig
  • 119bed narrowPeak
  • 107tagAlign
  • 15bed bed3+
  • 12fastq
  • 6bigBed narrowPeak
  • 1tagAlign bed3+
Organism
  • 133Homo sapiens
Biosample type
  • 60tissue
  • 59primary cell
  • 14in vitro differentiated cells
Organ
  • 37brain
  • 14pancreas
  • 6connective tissue
  • 3epithelium
  • 3liver
  • 1pituitary gland
Project
  • 85AMP
  • 48T1D
Genome assembly (visualization)
  • 123GRCh38
  • 122hg19
Lab
  • 87AMP-T2D consortium
  • 46Kyle Gaulton, UCSD
Audit category:
  • 6inconsistent ontology term
Audit category:
  • 4missing controlled_by
BIOSAMPLE
ASSAY

133 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans14
brain5
angular gyrus2
agranular insular cortex1
arcuate nucleus of hypothalamus1
primary cell
monocyte47
mesenchymal stem cell6
hepatocyte3
naive thymus-derived CD4-positive, alpha-beta T cell2
neutrophil1
in vitro differentiated cells
neural progenitor cell14
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