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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 33ChIP-seq
Assay category
  • 33DNA binding
Target of assay
  • 133histone
  • 133histone modification
  • 90narrow histone mark
  • 43broad histone mark
  • 33transcription factor
  • 17control
  • 9RNA binding protein
  • 2nucleotide modification
Date released
  • 18August, 2017
  • 11May, 2021
  • 2December, 2017
  • 1April, 2019
  • 1October, 2018
Available data
  • 22bam
  • 21bigWig
  • 21fastq
  • 18bed bed3+
  • 11bed narrowPeak
  • 3bigBed narrowPeak
Organism
  • 33Homo sapiens
Biosample type
  • 17in vitro differentiated cells
  • 16tissue
Organ
  • 10connective tissue
  • 7pancreas
  • 4adipose tissue
  • 4liver
  • 1kidney
Project
  • 33AMP
Genome assembly (visualization)
  • 21GRCh38
  • 21hg19
Lab
  • 22AMP-T2D consortium
  • 11Kyle Gaulton, UCSD
Audit category:
  • 10missing controlled_by
Audit category:
  • 4inconsistent control read length
BIOSAMPLE
ASSAY

33 results

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Clear Filters
ChIP-seq
in vitro differentiated cells
embryonic stem cell11
adipocyte6
tissue
islet of Langerhans6
liver4
white adipose tissue4
kidney1
pancreas1
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