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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 73ChIP-seq
Assay category
  • 73DNA binding
Target of assay
  • 387transcription factor
  • 128histone
  • 128histone modification
  • 88recombinant protein
  • 73RNA binding protein
  • 65broad histone mark
  • 63narrow histone mark
  • 60control
  • 32chromatin remodeller
  • 3nucleotide modification
  • 2other context
  • 2other post-translational modification
Date released
  • 37November, 2017
  • 20November, 2018
  • 6January, 2019
  • 3June, 2019
  • 2August, 2017
  • 2December, 2017
  • 2December, 2018
  • 1May, 2019
Available data
  • 73bam
  • 71bed narrowPeak
  • 71bigBed narrowPeak
  • 71bigWig
  • 69fastq
  • 9bed broadPeak
  • 9bigBed broadPeak
  • 1tar
Organism
  • 73Homo sapiens
Biosample type
  • 62cell line
  • 9primary cell
  • 2in vitro differentiated cells
Organ
  • 55liver
  • 9blood
  • 9bodily fluid
  • 7epithelium
  • 3brain
  • 2kidney
  • 2vasculature
  • 1blood vessel
  • 1eye
Project
  • 73AMP
Genome assembly (visualization)
  • 70hg19
  • 66GRCh38
Lab
  • 73AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
Audit category:
  • 2missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 3inconsistent control run_type
BIOSAMPLE
ASSAY

73 results

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ChIP-seq
cell line
HepG253
GM128789
primary cell
skeletal muscle myoblast2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac muscle cell1
choroid plexus epithelial cell1
in vitro differentiated cells
hepatocyte2
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