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Schema
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
73
ChIP-seq
Assay category
73
DNA binding
Target of assay
387
transcription factor
128
histone
128
histone modification
88
recombinant protein
73
RNA binding protein
65
broad histone mark
63
narrow histone mark
60
control
32
chromatin remodeller
3
nucleotide modification
2
other context
2
other post-translational modification
Date released
37
November, 2017
20
November, 2018
6
January, 2019
3
June, 2019
2
August, 2017
2
December, 2017
2
December, 2018
1
May, 2019
Available data
73
bam
71
bed narrowPeak
71
bigBed narrowPeak
71
bigWig
69
fastq
9
bed broadPeak
9
bigBed broadPeak
1
tar
Organism
73
Homo sapiens
Biosample type
62
cell line
9
primary cell
2
in vitro differentiated cells
Organ
55
liver
9
blood
9
bodily fluid
7
epithelium
3
brain
2
kidney
2
vasculature
1
blood vessel
1
eye
Project
73
AMP
Genome assembly (visualization)
70
hg19
66
GRCh38
Lab
73
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
Audit category:
2
missing controlled_by
Audit category:
6
inconsistent control read length
3
inconsistent control run_type
BIOSAMPLE
ASSAY
73 results
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ChIP-seq
cell line
HepG2
53
GM12878
9
primary cell
skeletal muscle myoblast
2
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
cardiac muscle cell
1
choroid plexus epithelial cell
1
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in vitro differentiated cells
hepatocyte
2
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