Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 65ChIP-seq
Assay category
  • 65DNA binding
Target of assay
  • 387transcription factor
  • 128histone
  • 128histone modification
  • 88recombinant protein
  • 73RNA binding protein
  • 65broad histone mark
  • 63narrow histone mark
  • 60control
  • 32chromatin remodeller
  • 3nucleotide modification
  • 2other context
  • 2other post-translational modification
Date released
  • 23October, 2019
  • 12December, 2017
  • 8November, 2017
  • 7May, 2019
  • 6August, 2017
  • 4June, 2019
  • 4October, 2018
  • 1April, 2019
Available data
  • 65bam
  • 62bigWig
  • 59bed narrowPeak
  • 45bigBed narrowPeak
  • 30fastq
  • 16bed broadPeak
  • 16bigBed broadPeak
  • 12tagAlign
  • 5bed bed3+
Organism
  • 65Homo sapiens
Biosample type
  • 21primary cell
  • 20tissue
  • 12cell line
  • 11in vitro differentiated cells
  • 1stem cell
Organ
  • 18epithelium
  • 18liver
  • 14blood vessel
  • 14vasculature
  • 9vein
  • 8pancreas
  • 5musculature of body
  • 4heart
  • 3brain
  • 2kidney
  • 2limb
  • 1artery
  • 1embryo
Project
  • 65AMP
Genome assembly (visualization)
  • 62hg19
  • 59GRCh38
Lab
  • 65AMP-T2D consortium
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 11inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

65 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
primary cell
endothelial cell of umbilical vein9
skeletal muscle myoblast6
skeletal muscle satellite cell4
kidney epithelial cell2
tissue
body of pancreas4
thoracic aorta4
brain3
heart3
liver3
cell line
HepG28
Panc14
in vitro differentiated cells
hepatocyte7
Posterior foregut1
definitive endodermal cell1
pancreatic endoderm1
primitive gut cell1
stem cell
hESC1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego