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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 756ChIP-seq
Assay category
  • 756DNA binding
Target of assay
  • 756histone modification
  • 755histone
  • 393broad histone mark
  • 361narrow histone mark
  • 266control
  • 94transcription factor
  • 32RNA binding protein
  • 4chromatin remodeller
  • 3other context
  • 3other post-translational modification
  • 1recombinant protein
Date released
  • 175August, 2017
  • 115October, 2019
  • 89May, 2021
  • 81May, 2019
  • 70November, 2017
  • 59April, 2019
  • 35May, 2024
  • 32September, 2018
  • 27May, 2020
  • 23October, 2018
  • 16February, 2018
  • 10November, 2019
  • 7December, 2017
  • 7October, 2017
  • 6January, 2019
  • 3August, 2021
  • 1June, 2019
Available data
  • 623bigWig
  • 612bed narrowPeak
  • 535bam
  • 292bigBed narrowPeak
  • 192tagAlign
  • 156fastq
  • 35bed broadPeak
Organism
  • 750Homo sapiens
Biosample type
  • 532tissue
  • 133primary cell
  • 78in vitro differentiated cells
  • 13cell line
Organ
  • 142brain
  • 121pancreas
  • 89heart
  • 71connective tissue
  • 66liver
  • 54epithelium
  • 45limb
  • 44blood vessel
  • 44vasculature
  • 32adipose tissue
  • 26kidney
  • 24musculature of body
  • 24nerve
  • 16artery
  • 10embryo
  • 6spleen
  • 4gonad
  • 4ovary
  • 2eye
  • 1lymph node
Project
  • 718AMP
  • 38T1D
Genome assembly (visualization)
  • 561GRCh38
  • 538hg19
Lab
  • 630AMP-T2D consortium
  • 88Kyle Gaulton, UCSD
  • 35Patrick T. Ellinor, Broad
  • 3Bing Ren, UCSD
Audit category:
  • 15inconsistent ontology term
Audit category:
  • 49missing controlled_by
Audit category:
  • 12inconsistent control read length
  • 1inconsistent assembly
BIOSAMPLE
ASSAY

756 results

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Clear Filters
ChIP-seq
tissue
liver60
islet of Langerhans37
left cardiac atrium35
subcutaneous abdominal adipose tissue31
tibial nerve24
primary cell
monocyte38
CD8-positive, alpha-beta T cell30
pancreatic endocrine cell23
pancreatic ductal cell13
pancreatic acinar cell8
in vitro differentiated cells
adipocyte37
embryonic stem cell22
pancreatic endoderm8
Hepatic endoderm2
definitive endodermal cell2
cell line
EndoC_BH110
HepG23
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