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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 361ChIP-seq
Assay category
  • 361DNA binding
Target of assay
  • 756histone modification
  • 755histone
  • 393broad histone mark
  • 361narrow histone mark
  • 266control
  • 94transcription factor
  • 32RNA binding protein
  • 4chromatin remodeller
  • 3other context
  • 3other post-translational modification
  • 1recombinant protein
Date released
  • 83October, 2019
  • 76August, 2017
  • 34May, 2021
  • 30May, 2019
  • 28November, 2017
  • 27May, 2020
  • 23April, 2019
  • 15May, 2024
  • 15September, 2018
  • 8February, 2018
  • 8October, 2018
  • 4December, 2017
  • 4November, 2019
  • 2August, 2021
  • 2January, 2019
  • 1June, 2019
  • 1October, 2017
Available data
  • 292bigWig
  • 284bed narrowPeak
  • 256bam
  • 99bigBed narrowPeak
  • 87tagAlign
  • 72fastq
  • 15bed broadPeak
Organism
  • 359Homo sapiens
Biosample type
  • 258tissue
  • 58primary cell
  • 39in vitro differentiated cells
  • 6cell line
Organ
  • 79brain
  • 57pancreas
  • 42liver
  • 36heart
  • 30connective tissue
  • 29epithelium
  • 13blood vessel
  • 13kidney
  • 13limb
  • 13vasculature
  • 12adipose tissue
  • 9musculature of body
  • 8nerve
  • 7embryo
  • 4gonad
  • 4ovary
  • 3artery
  • 2eye
  • 2spleen
  • 1lymph node
Project
  • 348AMP
  • 13T1D
Genome assembly (visualization)
  • 262GRCh38
  • 262hg19
Lab
  • 311AMP-T2D consortium
  • 33Kyle Gaulton, UCSD
  • 15Patrick T. Ellinor, Broad
  • 2Bing Ren, UCSD
Audit category:
  • 9inconsistent ontology term
Audit category:
  • 25missing controlled_by
Audit category:
  • 8inconsistent control read length
BIOSAMPLE
ASSAY

361 results

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Clear Filters
ChIP-seq
tissue
liver40
islet of Langerhans29
left cardiac atrium15
subcutaneous abdominal adipose tissue11
kidney10
primary cell
monocyte13
pancreatic endocrine cell12
CD8-positive, alpha-beta T cell10
pancreatic ductal cell7
pancreatic acinar cell4
in vitro differentiated cells
adipocyte16
embryonic stem cell11
pancreatic endoderm5
Hepatic endoderm2
definitive endodermal cell1
cell line
EndoC_BH14
HepG22
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