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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 94ChIP-seq
Assay category
  • 94DNA binding
Target of assay
  • 756histone modification
  • 755histone
  • 393broad histone mark
  • 361narrow histone mark
  • 266control
  • 94transcription factor
  • 32RNA binding protein
  • 4chromatin remodeller
  • 3other context
  • 3other post-translational modification
  • 1recombinant protein
Date released
  • 27August, 2017
  • 14October, 2018
  • 11December, 2017
  • 9August, 2021
  • 6November, 2018
  • 5April, 2019
  • 5May, 2021
  • 5May, 2024
  • 4May, 2019
  • 3December, 2018
  • 3February, 2021
  • 1June, 2019
  • 1November, 2019
Available data
  • 92bigWig
  • 79bam
  • 79bed narrowPeak
  • 61fastq
  • 34bigBed narrowPeak
  • 7tagAlign
  • 1bed bed3+
Organism
  • 94Homo sapiens
Biosample type
  • 47tissue
  • 30in vitro differentiated cells
  • 16cell line
  • 1primary cell
Organ
  • 30connective tissue
  • 15heart
  • 14liver
  • 13adipose tissue
  • 12pancreas
  • 6spleen
  • 5blood vessel
  • 5vasculature
  • 3artery
  • 3embryo
  • 2blood
  • 2bodily fluid
  • 2epithelium
Project
  • 94AMP
Genome assembly (visualization)
  • 87hg19
  • 83GRCh38
Lab
  • 79AMP-T2D consortium
  • 9Bing Ren, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Kyle Gaulton, UCSD
Audit category:
  • 5inconsistent ontology term
Audit category:
  • 14missing controlled_by
Audit category:
  • 6inconsistent control read length
BIOSAMPLE
ASSAY

94 results

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Clear Filters
ChIP-seq
tissue
body of pancreas9
white adipose tissue8
spleen6
heart left ventricle5
left cardiac atrium5
in vitro differentiated cells
adipocyte16
cardiomyocytes3
pancreatic endoderm3
Posterior foregut2
definitive endodermal cell2
cell line
HepG210
GM128782
smooth muscle cell of the coronary artery2
EndoC_BH11
iPSC derived cell line1
primary cell
cardiac fibroblast1
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