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Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
168
candidate regulatory elements
168
chromatin state
168
target gene predictions
Date released
504
September, 2022
Available data
336
bed bed3+
168
bed bed9
Organism
504
Homo sapiens
Biosample type
1242
tissue
504
cell line
468
primary cell
105
in vitro differentiated cells
Organ
75
bodily fluid
69
blood
69
lung
42
skin of body
brain
30
bone element
30
embryo
27
prostate gland
24
lymph node
21
kidney
21
mammary gland
12
intestine
12
large intestine
12
penis
9
connective tissue
9
liver
9
musculature of body
9
pancreas
9
uterus
3
epithelium
3
extraembryonic component
3
eye
3
gonad
3
limb
3
lymphoid tissue
3
mouth
3
placenta
3
testis
Project
504
AMP
Genome assembly (visualization)
504
hg19
168
GRCh38
organ_slims!
brain
BIOSAMPLE
TYPE
504 results
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Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
cell line
A549
18
18
18
K562
6
6
6
MCF-7
5
5
5
HeLa-S3
3
3
3
endometrium adenocarcinoma
3
3
3
immortal human breast epithelial cell line cell
3
3
3
22Rv1
2
2
2
LNCaP clone FGC
2
2
2
NAMALWA cell
2
2
2
T47D
2
2
2
8988T
1
1
1
A673
1
1
1
ACC112
1
1
1
ACHN
1
1
1
AG04449 cell
1
1
1
AG04450 cell
1
1
1
AG08395 cell
1
1
1
AG08396 cell
1
1
1
AG09309 cell
1
1
1
AG09319 cell
1
1
1
AG10803 cell
1
1
1
AG20443
1
1
1
BJ cell
1
1
1
C4-2B
1
1
1
CMK
1
1
1
COLO829
1
1
1
CWRU1
1
1
1
Caco-2 cell
1
1
1
Caki2
1
1
1
DND-41
1
1
1
DOHH2
1
1
1
EH
1
1
1
EL
1
1
1
ELF-1
1
1
1
ELR
1
1
1
ES-I3
1
1
1
G401
1
1
1
GM03348
1
1
1
GM04503
1
1
1
GM04504
1
1
1
GM06990
1
1
1
GM08714
1
1
1
GM10248
1
1
1
GM10266
1
1
1
GM12864
1
1
1
GM12865
1
1
1
GM12875
1
1
1
GM12878
1
1
1
GM12891
1
1
1
GM12892
1
1
1
GM18507
1
1
1
GM19238
1
1
1
GM19239
1
1
1
GM19240
1
1
1
GM23248
1
1
1
GM23338
1
1
1
H1-hESC
1
1
1
H4
1
1
1
H7-hESC
1
1
1
H9
1
1
1
HAP-1
1
1
1
HCT116
1
1
1
HEK293
1
1
1
HEK293T
1
1
1
HK-2 cell
1
1
1
HL-60
1
1
1
HPDE6-E6E7
1
1
1
HS-27A
1
1
1
HS-5
1
1
1
HT-29
1
1
1
HT1080
1
1
1
HTR-8/Svneo
1
1
1
HUES48
1
1
1
HUES6
1
1
1
HUES64
1
1
1
HepG2
1
1
1
HuH-7
1
1
1
HuH-7.5
1
1
1
IMR-90
1
1
1
KARPAS-422 cell
1
1
1
KBM-7
1
1
1
KMS-11
1
1
1
KOPT-K1
1
1
1
L1-S8
1
1
1
L1-S8R
1
1
1
LHCN-M2
1
1
1
LoVo cell
1
1
1
Loucy
1
1
1
MG63
1
1
1
MM.1S
1
1
1
NB4
1
1
1
NCI-H226 cell
1
1
1
NCI-H460 cell
1
1
1
NCI-H929
1
1
1
NT2-D1 cell
1
1
1
OCI-LY1
1
1
1
OCI-LY3
1
1
1
OCI-LY7
1
1
1
PC-3
1
1
1
PC-9
1
1
1
Panc1
1
1
1
RCC 7860
1
1
1
RPMI7951
1
1
1
RPMI8226
1
1
1
RWPE1
1
1
1
RWPE2
1
1
1
SJCRH30
1
1
1
SJSA1
1
1
1
SK-MEL-5
1
1
1
SU-DHL-6
1
1
1
SW480
1
1
1
UCSF-4
1
1
1
VCaP cell
1
1
1
WERI-Rb-1
1
1
1
WI38
1
1
1
colon carcinoma
1
1
1
colon epithelial cell
1
1
1
foreskin fibroblast
1
1
1
iPS DF 19.11
1
1
1
iPS DF 19.7
1
1
1
iPS DF 4.7 Cell Line
1
1
1
iPS DF 6.9
1
1
1
iPS-11a
1
1
1
iPS-15b
1
1
1
iPS-18a
1
1
1
iPS-18c
1
1
1
iPS-20b
1
1
1
iPS-NIHi11
1
1
1
iPS-NIHi7
1
1
1
lymphocyte
1
1
1
renal cell carcinoma
1
1
1
urothelium cell line
1
1
1
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