Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
406
candidate regulatory elements
406
chromatin state
406
target gene predictions
Date released
1217
September, 2022
1
February, 2024
Available data
812
bed bed3+
406
bed bed9
Organism
1218
Homo sapiens
Biosample type
1218
tissue
468
cell line
441
primary cell
105
in vitro differentiated cells
Organ
189
musculature of body
177
kidney
153
intestine
135
brain
135
limb
lung
99
heart
87
large intestine
69
extraembryonic component
69
stomach
57
small intestine
42
adrenal gland
42
placenta
39
ureter
33
thymus
blood vessel
30
pancreas
30
vasculature
24
adipose tissue
24
connective tissue
24
liver
21
embryo
21
gonad
21
spinal cord
18
esophagus
18
spleen
15
eye
12
artery
12
epithelium
12
lymphoid tissue
12
ovary
12
thyroid gland
9
bone element
9
nerve
9
skeleton
9
skin of body
9
testis
6
breast
6
mouth
6
prostate gland
6
tongue
6
urinary bladder
6
vagina
3
uterus
Project
1218
AMP
Genome assembly (visualization)
1218
hg19
406
GRCh38
organ_slims!
blood vessel
lung
BIOSAMPLE
TYPE
1218 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
chromatin state
target gene predictions
tissue
heart
19
19
19
stomach
19
19
19
brain
16
16
16
muscle of arm
16
16
16
small intestine
15
15
15
adrenal gland
14
14
14
kidney
14
14
14
placenta
14
14
14
large intestine
13
13
13
muscle of back
13
13
13
muscle of leg
13
13
13
thymus
11
11
11
right kidney
10
10
10
left kidney
9
9
9
renal cortex interstitium
9
9
9
renal pelvis
9
9
9
liver
7
7
7
spinal cord
7
7
7
adipose tissue
6
6
6
spleen
6
6
6
heart left ventricle
5
5
5
sigmoid colon
5
5
5
body of pancreas
4
4
4
chorionic villus
4
4
4
endocrine pancreas
4
4
4
gastrocnemius medialis
4
4
4
muscle of trunk
4
4
4
ovary
4
4
4
psoas muscle
4
4
4
thyroid gland
4
4
4
transverse colon
4
4
4
Peyer's patch
3
3
3
caudate nucleus
3
3
3
chorion membrane
3
3
3
heart right ventricle
3
3
3
layer of hippocampus
3
3
3
retina
3
3
3
skeletal muscle tissue
3
3
3
testis
3
3
3
tibial nerve
3
3
3
Brodmann (1909) area 46
2
2
2
angular gyrus
2
2
2
breast epithelium
2
2
2
cerebellum
2
2
2
cingulate gyrus
2
2
2
colonic mucosa
2
2
2
duodenal mucosa
2
2
2
esophagus
2
2
2
esophagus muscularis mucosa
2
2
2
esophagus squamous epithelium
2
2
2
eye
2
2
2
frontal cortex
2
2
2
left renal cortex interstitium
2
2
2
left renal pelvis
2
2
2
limb
2
2
2
lower leg skin
2
2
2
mucosa of rectum
2
2
2
muscle layer of colon
2
2
2
muscle layer of duodenum
2
2
2
omental fat pad
2
2
2
pancreas
2
2
2
parathyroid adenoma
2
2
2
prostate gland
2
2
2
right atrium auricular region
2
2
2
right renal cortex interstitium
2
2
2
right renal pelvis
2
2
2
stomach smooth muscle
2
2
2
substantia nigra
2
2
2
temporal lobe
2
2
2
tongue
2
2
2
trophoblast
2
2
2
urinary bladder
2
2
2
vagina
2
2
2
Ammon's horn
1
1
1
amnion
1
1
1
arm bone
1
1
1
cerebellar cortex
1
1
1
embryonic facial prominence
1
1
1
femur
1
1
1
gastroesophageal sphincter
1
1
1
germinal center
1
1
1
germinal matrix
1
1
1
globus pallidus
1
1
1
inferior parietal cortex
1
1
1
left cardiac atrium
1
1
1
leg bone
1
1
1
medulla oblongata
1
1
1
midbrain
1
1
1
middle frontal gyrus
1
1
1
mucosa of stomach
1
1
1
occipital lobe
1
1
1
pons
1
1
1
putamen
1
1
1
rectum smooth muscle tissue
1
1
1
right cardiac atrium
1
1
1
right lobe of liver
1
1
1
skin of body
1
1
1
superior temporal gyrus
1
1
1
umbilical cord
1
1
1
uterus
1
1
1
See all biosamples
Download