Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Embedding Matrix
Click or enter search terms to filter the experiments included in the matrix.
Embeddings type
53
Gene expression
10
Accessible chromatin
Date released
30
May, 2022
10
June, 2025
6
April, 2025
4
February, 2025
2
August, 2021
2
October, 2024
2
September, 2021
1
February, 2021
1
February, 2023
1
March, 2023
1
March, 2024
1
November, 2021
1
September, 2020
1
September, 2023
Available data
45
h5ad
14
rds
6
tsv
5
mtx
1
bed bed3
1
cloupe
1
tbi
Organism
59
Homo sapiens
Biosample type
57
tissue
7
primary cell
Organ
9
pancreas
7
connective tissue
6
adipose tissue
5
liver
5
vasculature
4
artery
4
blood vessel
4
heart
3
blood
3
bodily fluid
3
kidney
3
lung
3
musculature of body
2
bone element
2
epithelium
2
intestine
2
mouth
1
bone marrow
1
brain
1
eye
1
large intestine
1
lymph node
1
mammary gland
1
prostate gland
1
skin of body
1
small intestine
1
spleen
1
thymus
1
tongue
1
trachea
1
uterus
Project
56
AMP
2
LungMap
2
T1D
2
community
1
ENCODE
Genome assembly (visualization)
1
hg19
software_used.software.name!!
r
tissue_term_name!
skeletal muscle tissue
BIOSAMPLE
TYPE
63 results
search-icon
table-tab-icon
Clear Filters
Gene expression
Accessible chromatin
tissue
islet of Langerhans
2
4
heart
5
liver
4
1
pancreas
4
1
artery
3
1
+ See 28 more…
primary cell
islet of Langerhans
1
1
pancreas
1
1
peripheral blood mononuclear cell
1
1
cell
1
endothelial cell
1
+ See 3 more…
See all biosamples