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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 100ChIP-seq
Assay category
  • 100DNA binding
Target of assay
  • 1017histone modification
  • 1016histone
  • 514narrow histone mark
  • 514transcription factor
  • 501broad histone mark
  • 343control
  • 114RNA binding protein
  • 89recombinant protein
  • chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 31November, 2017
  • 19November, 2018
  • 11October, 2018
  • 7August, 2017
  • 5May, 2019
  • 5May, 2021
  • 5May, 2024
  • 4April, 2019
  • 4June, 2019
  • 3December, 2017
  • 2December, 2018
  • 2January, 2019
  • 1August, 2021
  • 1November, 2019
Available data
  • 92bigWig
  • 91bed narrowPeak
  • 89bam
  • 79bigBed narrowPeak
  • 75fastq
  • 7bed broadPeak
  • 7bigBed broadPeak
  • 2bed bed3+
  • 1tar
Organism
  • 100Homo sapiens
Biosample type
  • 53cell line
  • 28tissue
  • 10in vitro differentiated cells
  • 9primary cell
Organ
  • 50liver
  • 11heart
  • 10connective tissue
  • 9pancreas
  • 7epithelium
  • 5adipose tissue
  • 5blood
  • 5bodily fluid
  • 5vasculature
  • 4blood vessel
  • 3brain
  • 3kidney
  • 1artery
  • 1eye
Project
  • 100AMP
Genome assembly (visualization)
  • 87GRCh38
  • 86hg19
Lab
  • 89AMP-T2D consortium
  • 5Kyle Gaulton, UCSD
  • 5Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 4inconsistent ontology term
Audit category:
  • 1missing controlled_by
Audit category:
  • 1inconsistent control read length
target.investigated_as!
  • chromatin remodeller
BIOSAMPLE
ASSAY

100 results

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Clear Filters
ChIP-seq
cell line
HepG247
GM128785
EndoC_BH11
tissue
body of pancreas5
left cardiac atrium5
heart left ventricle3
omental fat pad3
islet of Langerhans2
in vitro differentiated cells
embryonic stem cell5
adipocyte4
hepatocyte1
primary cell
astrocyte of the cerebellum1
brain microvascular endothelial cell1
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
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