Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 22ChIP-seq
Assay category
  • 22DNA binding
Target of assay
  • 1017histone modification
  • 1016histone
  • 514narrow histone mark
  • 514transcription factor
  • 501broad histone mark
  • 343control
  • RNA binding protein
  • 89recombinant protein
  • 36chromatin remodeller
  • 5nucleotide modification
  • 5other context
  • 5other post-translational modification
Date released
  • 9November, 2017
  • 5November, 2018
  • 2August, 2017
  • 2December, 2017
  • 2December, 2018
  • 2January, 2019
Available data
  • 22bam
  • 22bed narrowPeak
  • 22bigWig
  • 22fastq
  • 20bigBed narrowPeak
  • 3bed broadPeak
  • 3bigBed broadPeak
Organism
  • 22Homo sapiens
Biosample type
  • 18cell line
  • 2in vitro differentiated cells
  • 2tissue
Organ
  • 15liver
  • 5blood
  • 5bodily fluid
  • 2connective tissue
Project
  • 22AMP
Genome assembly (visualization)
  • 22hg19
  • 21GRCh38
Lab
  • 22AMP-T2D consortium
Audit category:
  • 3inconsistent control
Audit category:
  • 4missing controlled_by
Audit category:
  • 8inconsistent control read length
  • 5inconsistent control run_type
target.investigated_as!
  • RNA binding protein
BIOSAMPLE
ASSAY

22 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
cell line
HepG213
GM128785
in vitro differentiated cells
adipocyte2
tissue
liver2
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego