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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
484
accessible chromatin
gene expression
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
152
differential activity
100
binding sites
81
variant allelic effects
44
eQTL
11
caQTL
5
hQTL
3
meQTL
3
sQTL
1
other
Date released
332
February, 2021
326
September, 2022
222
November, 2021
142
May, 2021
110
September, 2023
99
February, 2024
70
May, 2020
53
June, 2020
42
March, 2023
40
May, 2022
36
January, 2022
31
October, 2022
28
January, 2021
23
January, 2020
19
April, 2020
17
August, 2021
9
November, 2022
7
October, 2019
6
August, 2017
4
February, 2023
2
November, 2020
1
June, 2021
Available data
1223
bed bed3+
398
bigWig
164
bed bed9
152
tsv
27
bed bed9+
13
bigBed narrowPeak
4
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1574
Homo sapiens
Biosample type
2024
tissue
1932
cell line
1619
primary cell
331
in vitro differentiated cells
1
stem cell
Organ
470
epithelium
200
connective tissue
121
vasculature
111
kidney
83
blood vessel
78
pancreas
74
skin of body
40
liver
39
musculature of body
35
mammary gland
34
penis
31
brain
31
extraembryonic component
26
lung
21
artery
20
eye
19
heart
17
embryo
16
vein
15
intestine
13
bronchus
11
bone element
11
lymphatic vessel
10
bone marrow
9
blood
9
bodily fluid
9
placenta
7
adrenal gland
7
esophagus
7
prostate gland
7
stomach
5
trachea
4
uterus
3
gonad
3
large intestine
3
mouth
3
spinal cord
2
small intestine
2
thyroid gland
1
ovary
1
testis
1
thymus
Project
1237
AMP
222
ENCODE
110
KPMP
31
T1D
19
LungMap
Genome assembly (visualization)
1419
hg19
581
GRCh38
annotation_type!
gene expression
target gene predictions
BIOSAMPLE
TYPE
1619 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
candidate regulatory elements
histone modifications
chromatin state
differential activity
binding sites
variant allelic effects
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
18
86
1
4
2
1
1
CD8-positive, alpha-beta T cell
4
7
30
1
common myeloid progenitor, CD34-positive
27
13
B cell
6
14
8
fibroblast
16
1
6
2
CD4-positive, alpha-beta memory T cell
14
9
endothelial cell
15
1
2
2
1
2
macrophage
12
3
7
1
T cell
6
4
4
2
2
hepatocyte
8
1
4
1
1
2
regulatory T cell
5
5
1
3
1
2
endothelial cell of umbilical vein
2
6
5
2
1
CD8-positive, alpha-beta memory T cell
8
7
foreskin keratinocyte
11
4
foreskin fibroblast
1
6
2
1
4
mononuclear cell
7
6
1
natural killer cell
3
6
1
3
1
T-helper 1 cell
3
6
3
1
osteoblast
5
2
2
1
3
pancreatic ductal cell
6
2
3
1
1
skeletal muscle myoblast
2
4
1
3
2
1
smooth muscle cell
9
2
1
1
trophoblast cell
1
7
1
4
CD14-positive monocyte
8
4
CD4-positive, alpha-beta T cell
1
8
3
astrocyte
8
2
1
1
endothelial cell of hepatic sinusoid
6
6
excitatory neuron
12
fibroblast of lung
6
4
2
keratinocyte
2
3
2
3
1
1
mammary epithelial cell
1
3
3
1
4
neutrophil
4
2
2
2
1
1
pancreatic beta cell
8
3
1
pericyte cell
10
1
1
T-helper 17 cell
2
5
3
1
T-helper 2 cell
2
5
3
1
naive thymus-derived CD4-positive, alpha-beta T cell
1
4
2
1
1
1
1
pancreatic alpha cell
7
3
1
bronchial epithelial cell
1
4
1
2
2
neurosphere
7
3
pancreatic acinar cell
6
3
1
erythroblast
5
2
2
mammary gland epithelial cell
1
3
3
1
1
mature neutrophil
1
7
1
pancreatic delta cell
5
3
1
retinal pigment epithelial cell
3
2
1
1
2
skeletal muscle satellite cell
5
2
2
dermis blood vessel endothelial cell
6
2
fibroblast of cardiac tissue
2
3
3
fibroblast of dermis
4
3
1
fibroblast of mammary gland
1
2
1
1
2
fibroblast of pulmonary artery
1
2
1
1
2
fibroblast of villous mesenchyme
1
2
1
1
2
hepatic stellate cell
3
1
1
1
1
kidney tubule cell
2
3
2
skeletal muscle fiber
5
2
CD1c-positive myeloid dendritic cell
1
2
1
1
1
cardiac muscle cell
1
2
1
2
choroid plexus epithelial cell
1
2
1
1
1
enterocyte
3
3
epithelial cell of prostate
4
2
epithelial cell of proximal tubule
1
2
1
1
1
fibroblast of breast
4
2
glomerular endothelial cell
2
2
1
1
glutamatergic neuron
6
kidney glomerular epithelial cell
2
2
1
1
mesenchymal stem cell
2
1
1
1
1
myoepithelial cell of mammary gland
4
2
naive T cell
3
3
peripheral blood mononuclear cell
4
1
1
pulmonary artery endothelial cell
1
2
1
1
1
renal cortical epithelial cell
2
2
1
1
skin fibroblast
2
2
2
cardiac fibroblast
3
2
CD14-positive, CD16-negative classical monocyte
5
astrocyte of the cerebellum
1
2
1
1
astrocyte of the hippocampus
1
2
1
1
epithelial cell of esophagus
2
1
2
foreskin melanocyte
4
1
glomerular visceral epithelial cell
2
2
1
inhibitory neuron
5
kidney epithelial cell
1
2
1
1
myofibroblast cell
1
1
3
pancreatic stellate cell
2
3
skeletal muscle cell
1
2
1
1
smooth muscle cell of the brain vasculature
1
2
1
1
tracheal epithelial cell
1
2
2
type I muscle cell
3
1
1
type II muscle cell
3
1
1
type II pneumocyte
4
1
T-cell
4
acute myeloid leukemia cell
2
2
alternatively activated macrophage
4
aortic adventitial fibroblast
1
1
2
aortic endothelial cell
2
1
1
basal cell
2
2
brain microvascular endothelial cell
1
2
1
cardiac fibroblast
3
1
cortical cell of adrenal gland
3
1
dermis lymphatic vessel endothelial cell
2
2
fibroblast of peridontal ligament
1
2
1
fibroblast of the aortic adventitia
2
1
1
iris pigment epithelial cell
1
2
1
kidney capillary endothelial cell
1
1
1
1
luminal epithelial cell of mammary gland
2
1
1
lung microvascular endothelial cell
3
1
mast cell
1
1
1
1
memory B cell
4
naive thymus-derived CD8-positive, alpha-beta T cell
3
1
non-pigmented ciliary epithelial cell
1
2
1
pancreatic endothelial cell
1
3
plasma cell
2
1
1
preadipocyte
1
2
1
renal epithelial cell
1
1
2
CD4-positive helper T cell
1
2
Ishikawa
1
1
1
T follicular helper cell
2
1
Th1 cell
1
1
1
Th17 cell
1
1
1
adipocyte
2
1
astrocyte of the spinal cord
2
1
blood cell
3
bone marrow cell
2
1
brain pericyte
1
1
1
colon epithelial cell
3
endothelial cell of lymphatic vessel
3
erythroid cell
1
1
1
fibroblast of gingiva
2
1
fibroblast of the conjunctiva
2
1
gabaergic neuron
3
goblet cell
1
2
inflammatory macrophage
3
mesothelial cell
2
1
mononuclear cell of bone marrow
1
2
myotube
1
2
naive B cell
3
neoplastic cell
1
1
1
pancreatic MUC5B+ductal cell
3
pancreatic alpha+beta cell
3
pancreatic cycling alpha cell
3
pancreatic gamma+epsilon cell
3
pancreatic macrophage cell
3
pancreatic mast cell
3
pancreatic polypeptide-secreting cell
2
1
pancreatic quiescent stellate cell
3
peripheral blood stem cell
1
1
1
pre-B acute lymphoblastic leukemia cell
2
1
pulmonary interstitial fibroblast
1
1
1
stromal cell of bone marrow
2
1
type I pneumocyte
3
Adaptive / Maladaptive / Repairing Fibroblast
2
Adaptive / Maladaptive / Repairing Proximal Tubule Epithelial Cell
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 1
2
Adaptive / Maladaptive / Repairing Thick Ascending Limb Cell Type 2
2
Adipose stromal cell
1
1
Afferent / Efferent Arteriole Endothelial Cell
2
B Cell
2
B-lymphocyte
1
1
CD34-positive, CD38-negative hematopoietic stem cell
1
1
Classical Dendritic Cell
2
Connecting Tubule Cell
2
Connecting Tubule Intercalated Cell Type A
2
Connecting Tubule Principal Cell
2
Cortical Thick Ascending Limb Cell
2
Cycling Endothelial Cell
2
Cycling Epithelial Cell
2
Cycling T Cell
2
Cytotoxic T Cell
2
Degenerative Connecting Tubule Cell
2
Degenerative Connecting Tubule Cell / Principal Cell
2
Degenerative Cortical Thick Ascending Limb Cell
2
Degenerative Distal Convoluted Tubule Cell
2
Degenerative Intercalated Cell Type A
2
Degenerative Peritubular Capillary Endothelial Cell
2
Degenerative Principal Cell
2
Degenerative Proximal Tubule Epithelial Cell
2
Degenerative Proximal Tubule Epithelial Cell / Descending Thin Limb Cell
2
Degenerative Vascular Smooth Muscle Cell
2
Descending Thin Limb Cell Type 1
2
Distal Convoluted Tubule Cell Type 1
2
Fibroblast
2
Glomerular Capillary Endothelial Cell
2
Intercalated Cell Type A
2
Intercalated Cell Type B
2
Lymphatic Endothelial Cell
2
M2 Macrophage
2
Medullary Thick Ascending Limb Cell
2
Mesangial Cell
2
Monocyte
2
Monocyte-derived Cell
2
Muller cell
2
Myofibroblast
2
Natural Killer T Cell
2
Natural Killer T Cell Type 1
2
Natural Killer T Cell Type 2
2
Non-Classical Monocyte
2
Parietal Epithelial Cell
2
Peritubular Capillary Endothelial Cell
2
Plasma Cell
2
Plasmacytoid Dendritic Cell
2
Podocyte
2
Principal Cell
2
Proximal Tubule Epithelial Cell Segment 1 and 2
2
Proximal Tubule Epithelial Cell Segment 3
2
Regulatory T Cell
2
Renin-positive Juxtaglomerular Granular Cell
2
Rhabdoid Tumor of the Kidney
1
1
Schwann cell
2
T Cell
2
Th2 cell
1
1
Transitional Principal-Intercalated Cell
2
Vascular Smooth Muscle Cell / Pericyte
2
activated CD4-positive, alpha-beta T cell
1
1
activated CD8-positive, alpha-beta T cell
1
1
amnion mesenchymal stem cell
1
1
amniotic stem cell
1
1
blood vessel smooth muscle cell
2
capillary endothelial cell
2
cardiac muscle myoblast
1
1
central memory CD8-positive, alpha-beta T cell
2
chronic lymphocytic leukemia cell
1
1
ciliated cell
2
club cell
2
columnar chondrocyte
1
1
dermis microvascular lymphatic vessel endothelial cell
2
effector CD4-positive, alpha-beta T cell
2
effector T cell
2
effector memory CD8-positive, alpha-beta T cell
2
endocardial cell
2
enteric neuron
2
enteric smooth muscle cell
2
epidermal melanocyte
1
1
epithelial cell of amnion
1
1
erythroid progenitor cell
1
1
extracellular matrix secreting cell
2
fetal cardiomyocyte
2
gamma-delta T cell
2
glial cell
2
head and neck squamous cell carcinoma
1
1
leukemic stem cell
1
1
leukocyte
2
mammary stem cell
1
1
mantle cell lymphoma cell
2
mature natural killer cell
2
megakaryocyte
2
memory T cell
2
memory regulatory T cell
2
mesangial cell
2
meso-epithelial cell
1
1
microglial cell
1
1
naive regulatory T cell
2
naive t cell
1
1
neuron
2
neuronal stem cell
1
1
oligodendrocyte
2
oligodendrocyte precursor cell
2
pancreatic endocrine cell
1
1
parietal cell
1
1
peptic cell
1
1
peripheral blood-derived erythroblast
2
plasmacytoid dendritic cell
2
primordial germ cell
1
1
prostate gland cancer cell
1
1
regular cardiac myocyte
1
1
renal proximal tubule cell
1
1
schwann cell
2
small cell ovarian carcinoma cell
1
1
smooth muscle cell of the esophagus
2
somatic muscle myotube
1
1
thyroid follicular cell
1
1
vascular associated smooth muscle cell
2
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B-Lymphocytes
1
B-cell lymphoma cell
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-Positive T-Lymphocytes
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
Glioblastoma
1
Heart fetal (cardiac muscle cell)
1
Leydig cell
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
acute myeloid leukemia
1
alveolar cell type II
1
alveolar macrophage
1
amniotic epithelial cell
1
aortic smooth muscle cell
1
basal cell of epidermis
1
bone cell
1
bronchial goblet cell
1
cardiac endothelial cell
1
cholangiocyte
1
chromaffin cell of adrenal gland
1
ciliated epithelial cell
1
colon goblet cell
1
colorectal cancer
1
conventional dendritic cell
1
dedifferentiated amniotic fluid mesenchymal stem cell
1
eccrine cell
1
effector memory CD4-positive, alpha-beta T cell
1
endothelial cell of artery
1
endothelial cell of coronary artery
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
enteroendocrine cell
1
erythrocyte
1
extravillous trophoblast
1
fat cell
1
fetal thymocyte
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
foveolar cell of stomach
1
gastric goblet cell
1
granular cell of epidermis
1
granulocyte
1
granulosa cell
1
head and neck neoplasia
1
helper T cell
1
hepatoblast
1
immature natural killer cell
1
induced T-regulatory cell
1
intestinal epithelial cell
1
intestinal tuft cell
1
islet of Langerhans
1
kidney distal convoluted tubule epithelial cell
1
kidney interstitial cell
1
kidney loop of Henle epithelial cell
1
kidney proximal convoluted tubule epithelial cell
1
kidney proximal convoluted tubule epithelial cell & kidney proximal straight tubule epithelial cell
1
kidney proximal straight tubule epithelial cell
1
luminal epithelial cell of prostatic duct
1
lung neuroendocrine cell
1
luteal cell
1
lymphocyte of B lineage
1
lymphocyte(CL:0000542) and natural killer cell(CL:0000623)
1
macrophage(CL:0000235) and neutrophil(CL:0000775)
1
mature NK T cell
1
mature eosinophil
1
melanocyte
1
meningioma cell
1
metanephros
1
microglial cell/astrocyte
1
mycosis fungoides
1
myeloid dendritic cell
1
myeloid leukocyte
1
myoepithelial cell
1
naive B cel
1
natural killer cell mediated cytotoxicity
1
neural cell
1
neural progenitor cell
1
neuroendocrine cell
1
neutrophil progenitor cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
non-neuronal cell
1
pancreatic immune cell
1
paneth cell
1
parietal epithelial cell
1
peripheral blood
1
peripheral neuron
1
photoreceptor cell
1
placental hematopoietic stem cell
1
placental villus capillary endothelial cell
1
progenitor cell
1
proximal tubule cells with injury markers
1
regular atrial cardiac myocyte
1
renal intercalated cell
1
renal principal cell
1
respiratory goblet cell
1
retinal bipolar neuron
1
seminoma cell
1
sensory neuron
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
somatic gonadal cell
1
sperm
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
sympathetic neuron
1
trophoblast giant cell
1
type I cell of adrenal cortex
1
type II cell of adrenal cortex
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
ureteric bud
1
urinary bladder cancer cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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