Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
516
accessible chromatin
9
gene expression
4
variant allelic effects
3
target gene predictions
2
chromatin state
Date released
222
November, 2021
62
January, 2020
53
May, 2020
38
February, 2024
28
January, 2021
20
August, 2021
19
April, 2020
19
February, 2023
14
February, 2021
13
May, 2021
10
November, 2019
9
November, 2022
7
May, 2022
7
October, 2019
4
September, 2022
3
September, 2018
2
May, 2019
2
November, 2020
1
January, 2022
1
June, 2021
Available data
5576
bed bed3+
829
bed bed9
751
tsv
534
bigWig
108
txt
35
bigBed bed9
34
bed bed9+
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
490
Homo sapiens
Biosample type
410
primary cell
120
tissue
in vitro differentiated cells
4
cell line
Organ
174
epithelium
57
pancreas
53
connective tissue
36
kidney
34
eye
31
vasculature
23
blood vessel
23
liver
22
heart
20
brain
16
musculature of body
14
limb
11
intestine
10
bone element
9
artery
9
lung
8
skeleton
6
adrenal gland
5
adipose tissue
5
skin of body
5
stomach
3
extraembryonic component
3
large intestine
3
lymphatic vessel
3
mammary gland
3
ureter
2
bone marrow
2
bronchus
2
embryo
2
esophagus
2
nerve
2
placenta
2
small intestine
1
gonad
1
ovary
1
spleen
1
thymus
1
thyroid gland
1
uterus
1
vein
Project
265
AMP
222
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
525
hg19
375
GRCh38
annotation_type!
Fine-mapped variants
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
534 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
variant allelic effects
target gene predictions
chromatin state
primary cell
monocyte
16
fibroblast
14
endothelial cell
13
excitatory neuron
12
hepatocyte
7
5
+ See 180 more…
tissue
retina
16
pigmented layer of retina
13
kidney
9
1
coronary artery
3
1
islet of Langerhans
4
+ See 59 more…
cell line
EndoC_BH1
1
HepG2
1
glomerular visceral epithelial cell
1
smooth muscle cell of the coronary artery
1
See all biosamples
Download