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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1671
candidate regulatory elements
1357
target gene predictions
977
histone modifications
910
accessible chromatin
817
binding sites
683
gene expression
169
eQTL
167
differential activity
140
variant allelic effects
Fine-mapped variants
74
chromatin state
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2590
February, 2021
1675
September, 2022
384
May, 2021
378
February, 2024
333
November, 2021
289
June, 2020
286
September, 2023
152
May, 2020
128
August, 2021
106
January, 2022
101
October, 2022
83
January, 2020
68
March, 2023
64
February, 2020
56
January, 2021
56
March, 2020
49
May, 2022
44
November, 2022
34
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
13
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5923
bed bed3+
bed bed9
826
tsv
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
bam
3
bed gappedPeak
3
xls
Organism
6954
Homo sapiens
Biosample type
2302
primary cell
2173
cell line
2091
tissue
430
in vitro differentiated cells
4
stem cell
Organ
896
epithelium
575
kidney
411
connective tissue
364
brain
298
musculature of body
256
pancreas
241
lung
234
intestine
225
vasculature
200
heart
193
bodily fluid
188
embryo
185
limb
184
blood
170
skin of body
168
blood vessel
141
large intestine
138
liver
113
extraembryonic component
100
eye
96
stomach
79
uterus
75
adipose tissue
75
bone element
73
mammary gland
65
prostate gland
65
small intestine
61
artery
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
32
spinal cord
28
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
18
nerve
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6295
AMP
333
ENCODE
281
KPMP
60
T1D
19
LungMap
9
community
5
ITG
Genome assembly (visualization)
6019
hg19
935
GRCh38
4
hg18
annotation_type!
Fine-mapped variants
files.file_type!
bed bed9
bam
BIOSAMPLE
TYPE
7002 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
chromatin state
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
7
1
15
2
9
1
2
2
B cell
14
10
6
2
+ See 448 more…
cell line
HeLa-S3
5
55
1
H1-hESC
1
39
1
1
2
8
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
+ See 765 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 261 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 121 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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