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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
640
gene expression
528
accessible chromatin
158
differential activity
Fine-mapped variants
25
eQTL
4
variant allelic effects
3
target gene predictions
2
chromatin state
2
variant to gene
1
representative DNase hypersensitivity sites
Date released
281
September, 2023
222
November, 2021
192
February, 2021
101
May, 2021
96
February, 2024
82
January, 2020
69
August, 2021
57
March, 2023
53
May, 2020
47
February, 2020
30
March, 2024
28
January, 2021
20
February, 2023
19
April, 2020
12
November, 2019
11
November, 2022
9
October, 2019
7
March, 2020
7
May, 2022
4
January, 2022
4
September, 2022
3
November, 2020
3
September, 2018
2
January, 2018
2
May, 2019
1
July, 2020
1
June, 2021
Available data
5923
bed bed3+
869
bed bed9
826
tsv
546
bigWig
108
txt
40
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
1318
Homo sapiens
Biosample type
990
primary cell
260
tissue
87
in vitro differentiated cells
26
cell line
Organ
491
epithelium
287
kidney
130
pancreas
112
connective tissue
82
vasculature
57
blood vessel
52
brain
42
heart
39
liver
38
eye
24
musculature of body
22
limb
21
adipose tissue
19
artery
14
bone element
14
intestine
12
embryo
10
lung
8
lymphatic vessel
8
skeleton
7
adrenal gland
7
skin of body
7
stomach
5
large intestine
5
nerve
4
esophagus
3
extraembryonic component
3
gonad
3
mammary gland
3
ureter
3
uterus
2
bone marrow
2
bronchus
2
ovary
2
placenta
2
small intestine
2
spinal cord
2
spleen
2
thyroid gland
2
vein
1
blood
1
bodily fluid
1
breast
1
lymphoid tissue
1
mouth
1
pituitary gland
1
prostate gland
1
testis
1
thymus
1
tongue
1
urinary bladder
1
vagina
Project
813
AMP
281
KPMP
222
ENCODE
28
T1D
19
LungMap
Genome assembly (visualization)
561
hg19
407
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
1363 results
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Clear Filters
gene expression
accessible chromatin
differential activity
eQTL
variant allelic effects
target gene predictions
chromatin state
variant to gene
representative DNase hypersensitivity sites
primary cell
monocyte
15
16
endothelial cell
8
13
epithelial cell of proximal tubule
15
1
hepatocyte
9
7
fibroblast
14
+ See 293 more…
tissue
retina
1
16
1
kidney
7
9
1
islet of Langerhans
9
4
2
pigmented layer of retina
13
subcutaneous adipose tissue
5
2
1
1
+ See 114 more…
in vitro differentiated cells
cardiomyocytes
11
extended pluripotent stem (EPS) cells
9
induced pluripotent stem cell
9
progenitor cell of endocrine pancreas
9
neural progenitor cell
7
+ See 25 more…
cell line
EndoC_BH1
8
1
1
H1-hESC
8
smooth muscle cell of the coronary artery
1
1
HepG2
1
RCC 7860 HIF1a re-expression
1
+ See 4 more…
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