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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
99
target gene predictions
77
accessible chromatin
67
candidate regulatory elements
50
binding sites
49
gene expression
42
chromatin state
33
differential activity
30
histone modifications
17
eQTL
11
variant allelic effects
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
113
September, 2022
101
February, 2021
53
February, 2024
45
March, 2023
37
May, 2021
20
January, 2021
19
October, 2022
18
November, 2021
16
June, 2020
10
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
5
August, 2017
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
340
bed bed3+
74
tsv
57
bigWig
36
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
479
Homo sapiens
Biosample type
229
cell line
135
primary cell
112
tissue
3
in vitro differentiated cells
Organ
949
epithelium
652
kidney
452
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
439
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
389
hg19
109
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
479 results
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Clear Filters
target gene predictions
accessible chromatin
candidate regulatory elements
binding sites
gene expression
chromatin state
differential activity
histone modifications
eQTL
variant allelic effects
sQTL
variant to gene
cell line
K562
23
1
7
2
7
1
EndoC_BH1
1
8
8
3
1
GM12878
8
1
2
2
2
1
GM06990
1
1
2
2
1
1
GM19240
2
1
1
2
1
1
+ See 29 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 14 more…
tissue
islet of Langerhans
1
6
2
11
3
1
13
1
2
2
pancreas
5
5
5
1
3
1
1
1
body of pancreas
5
8
2
4
1
1
endocrine pancreas
4
7
4
blood
2
+ See 8 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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