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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
88
accessible chromatin
80
candidate regulatory elements
78
target gene predictions
gene expression
48
chromatin state
31
binding sites
25
histone modifications
19
eQTL
16
variant allelic effects
14
differential activity
Fine-mapped variants
2
caQTL
2
pQTL
Date released
120
September, 2022
87
February, 2021
50
November, 2021
20
June, 2020
16
February, 2024
13
May, 2021
12
October, 2022
10
August, 2021
10
May, 2020
9
January, 2020
8
September, 2023
7
August, 2017
7
November, 2022
6
January, 2022
6
March, 2023
3
April, 2020
3
March, 2020
3
May, 2022
2
February, 2020
2
January, 2021
2
November, 2020
2
October, 2019
2
September, 2018
1
February, 2023
1
June, 2021
Available data
330
bed bed3+
55
bigWig
41
bed bed9
16
tsv
2
bigBed bed9
1
bigBed narrowPeak
Organism
403
Homo sapiens
Biosample type
250
primary cell
73
tissue
48
in vitro differentiated cells
31
cell line
1
stem cell
Organ
696
epithelium
450
kidney
411
brain
403
connective tissue
358
musculature of body
310
lung
286
intestine
230
limb
225
heart
224
pancreas
221
vasculature
217
bodily fluid
206
blood
205
embryo
202
skin of body
172
large intestine
170
blood vessel
146
extraembryonic component
129
liver
117
stomach
108
eye
87
mammary gland
85
bone element
84
small intestine
81
uterus
77
prostate gland
73
placenta
72
adrenal gland
70
adipose tissue
64
penis
64
ureter
62
lymph node
61
artery
49
thymus
48
gonad
43
esophagus
39
spinal cord
33
spleen
25
testis
23
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
20
nerve
18
lymphatic vessel
18
mouth
18
skeleton
16
bronchus
13
bone marrow
12
breast
12
pituitary gland
9
tongue
9
urinary bladder
9
vagina
5
trachea
4
nose
Project
338
AMP
50
ENCODE
6
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
379
hg19
116
GRCh38
2
hg18
annotation_type!
Fine-mapped variants
gene expression
BIOSAMPLE
TYPE
403 results
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Clear Filters
accessible chromatin
candidate regulatory elements
target gene predictions
chromatin state
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
caQTL
pQTL
primary cell
fibroblast
16
4
1
2
6
pericyte cell
10
1
10
1
fibroblast of lung
6
4
4
2
foreskin fibroblast
1
6
2
1
4
2
osteoblast
5
2
2
1
3
2
+ See 36 more…
tissue
adipose tissue
2
7
8
6
1
4
1
omental fat pad
2
5
2
2
2
subcutaneous adipose tissue
2
2
1
6
1
1
subcutaneous abdominal adipose tissue
5
1
cartilage tissue
1
2
2
+ See 5 more…
in vitro differentiated cells
adipocyte
4
4
6
6
1
1
mesenchymal stem cell
1
3
3
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
1
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
foreskin fibroblast
1
1
1
adipose tissue derived mesenchymal stem cell
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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