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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
144
candidate regulatory elements
123
target gene predictions
110
accessible chromatin
96
chromatin state
67
gene expression
35
binding sites
29
histone modifications
26
variant allelic effects
25
eQTL
Fine-mapped variants
14
differential activity
4
caQTL
2
pQTL
Date released
219
September, 2022
151
February, 2021
57
November, 2021
23
February, 2024
23
June, 2020
22
January, 2020
21
May, 2020
19
August, 2021
19
May, 2021
18
February, 2020
17
September, 2023
12
October, 2022
9
January, 2022
9
March, 2020
7
August, 2017
7
March, 2023
7
November, 2022
6
April, 2019
4
February, 2023
4
October, 2019
3
April, 2020
3
May, 2022
3
November, 2019
3
November, 2020
2
January, 2021
2
September, 2018
1
August, 2018
1
January, 2018
1
June, 2021
1
May, 2019
Available data
486
bed bed3+
84
bed bed9
76
tsv
75
bigWig
12
bigBed bed9
7
txt
1
bigBed narrowPeak
Organism
675
Homo sapiens
Biosample type
295
primary cell
294
tissue
50
in vitro differentiated cells
35
cell line
1
stem cell
Organ
949
epithelium
652
kidney
452
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
594
AMP
57
ENCODE
15
KPMP
4
ITG
3
LungMap
2
T1D
Genome assembly (visualization)
581
hg19
194
GRCh38
2
hg18
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
675 results
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Clear Filters
candidate regulatory elements
target gene predictions
accessible chromatin
chromatin state
gene expression
binding sites
histone modifications
variant allelic effects
eQTL
differential activity
caQTL
pQTL
primary cell
fibroblast
4
16
1
6
2
pericyte cell
1
10
10
1
osteoblast
2
2
5
1
2
3
2
fibroblast of lung
6
4
4
2
foreskin fibroblast
6
2
1
1
4
2
+ See 49 more…
tissue
heart
37
20
5
21
3
1
1
2
heart left ventricle
11
7
3
8
1
1
2
1
adipose tissue
7
8
2
6
3
1
1
4
heart right ventricle
6
5
1
5
1
1
coronary artery
3
3
3
3
1
2
2
1
+ See 20 more…
in vitro differentiated cells
adipocyte
4
6
4
6
1
1
1
mesenchymal stem cell
3
3
1
2
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 8 more…
cell line
GM23248
2
1
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
1
smooth muscle cell of the coronary artery
1
1
1
1
foreskin fibroblast
1
1
1
+ See 8 more…
stem cell
mesenchymal stem cell
1
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