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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
69
candidate regulatory elements
44
target gene predictions
33
chromatin state
10
accessible chromatin
6
binding sites
5
histone modifications
2
eQTL
2
gene expression
Date released
98
September, 2022
46
February, 2021
7
June, 2020
6
November, 2021
5
May, 2021
August, 2017
3
February, 2024
2
January, 2022
2
March, 2024
1
March, 2020
1
October, 2022
Available data
134
bed bed3+
33
bed bed9
3
bigWig
2
tsv
Organism
171
Homo sapiens
Biosample type
131
tissue
34
cell line
6
primary cell
Organ
946
epithelium
652
kidney
445
connective tissue
424
brain
366
musculature of body
310
lung
285
intestine
269
pancreas
256
vasculature
246
heart
235
limb
216
bodily fluid
214
embryo
205
blood
203
skin of body
194
blood vessel
171
large intestine
150
liver
146
extraembryonic component
118
stomach
109
eye
89
bone element
86
mammary gland
83
small intestine
83
uterus
81
adipose tissue
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
22
nerve
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
165
AMP
6
ENCODE
Genome assembly (visualization)
167
hg19
43
GRCh38
annotation_type!
Fine-mapped variants
month_released!
August, 2017
BIOSAMPLE
TYPE
171 results
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Clear Filters
candidate regulatory elements
target gene predictions
chromatin state
accessible chromatin
binding sites
histone modifications
eQTL
gene expression
tissue
large intestine
27
14
13
1
1
sigmoid colon
10
7
5
1
transverse colon
8
5
4
1
1
colonic mucosa
4
2
2
1
mucosa of rectum
4
2
2
+ See 7 more…
cell line
HT-29
2
2
1
1
1
1
SW480
2
1
1
1
1
1
HCT116
2
3
1
HCT-116 cell
1
1
2
RKO
1
1
1
1
+ See 3 more…
primary cell
colon epithelial cell
3
3
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