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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
102
target gene predictions
78
candidate regulatory elements
40
chromatin state
13
accessible chromatin
10
binding sites
7
histone modifications
4
gene expression
3
eQTL
Date released
110
September, 2022
56
February, 2021
54
February, 2024
9
June, 2020
8
November, 2021
7
May, 2021
4
March, 2024
3
August, 2017
3
January, 2022
2
October, 2022
1
March, 2020
Available data
213
bed bed3+
37
bed bed9
4
bigWig
4
tsv
Organism
257
Homo sapiens
Biosample type
147
tissue
99
cell line
11
primary cell
Organ
949
epithelium
652
kidney
452
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
249
AMP
8
ENCODE
Genome assembly (visualization)
250
hg19
101
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
257 results
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target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
binding sites
histone modifications
gene expression
eQTL
tissue
large intestine
14
27
13
1
1
sigmoid colon
7
10
5
1
transverse colon
5
8
4
1
1
colonic mucosa
2
4
3
1
mucosa of rectum
2
4
3
+ See 11 more…
cell line
HeLa-S3
55
5
3
1
HT-29
2
2
1
1
1
1
SW480
1
2
1
1
1
1
HCT116
3
2
1
HCT-116 cell
1
1
2
+ See 5 more…
primary cell
colon epithelial cell
3
3
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
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