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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
265
gene expression
255
candidate regulatory elements
241
accessible chromatin
208
target gene predictions
132
chromatin state
93
differential activity
50
binding sites
48
variant allelic effects
36
histone modifications
10
eQTL
Fine-mapped variants
4
caQTL
Date released
370
September, 2022
293
February, 2021
155
September, 2023
138
November, 2021
92
February, 2024
40
May, 2021
38
March, 2023
33
June, 2020
24
August, 2021
20
January, 2021
20
May, 2020
19
January, 2020
15
February, 2020
15
November, 2022
12
February, 2023
9
March, 2020
9
October, 2022
7
April, 2020
6
August, 2017
6
August, 2018
6
October, 2019
5
March, 2024
5
May, 2022
2
May, 2019
1
January, 2022
1
July, 2020
1
November, 2019
Available data
846
bed bed3+
333
tsv
192
bigWig
126
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
5
bigBed bed9
3
bam
3
bed gappedPeak
3
xls
Organism
1342
Homo sapiens
Biosample type
869
primary cell
379
tissue
66
cell line
28
in vitro differentiated cells
Organ
949
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
1020
AMP
155
KPMP
138
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
984
hg19
330
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
1342 results
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Clear Filters
gene expression
candidate regulatory elements
accessible chromatin
target gene predictions
chromatin state
differential activity
binding sites
variant allelic effects
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
2
1
1
2
hepatocyte
13
1
8
3
1
1
2
4
epithelial cell of proximal tubule
16
2
1
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
6
2
4
5
2
1
+ See 155 more…
tissue
muscle of arm
33
1
16
16
1
muscle of leg
27
2
14
15
muscle of back
28
13
13
pigmented layer of retina
20
psoas muscle
7
1
8
4
+ See 41 more…
cell line
EndoC_BH1
8
8
1
3
1
LHCN-M2
2
1
1
1
1
1
GM18507
1
1
2
1
1
A673
2
2
1
SJCRH30
2
1
1
1
+ See 10 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 5 more…
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