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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
candidate regulatory elements
17
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
45
March, 2023
33
May, 2021
31
September, 2022
25
February, 2024
20
February, 2021
20
January, 2021
18
November, 2021
8
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
3
August, 2017
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
135
bed bed3+
73
tsv
57
bigWig
14
bigBed narrowPeak
13
bed bed9
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
248
Homo sapiens
Biosample type
126
primary cell
89
tissue
30
cell line
3
in vitro differentiated cells
Organ
849
epithelium
493
kidney
372
connective tissue
319
brain
248
pancreas
223
musculature of body
207
vasculature
180
lung
176
heart
176
intestine
171
bodily fluid
164
blood
158
embryo
156
blood vessel
141
limb
130
liver
129
skin of body
105
large intestine
91
eye
87
extraembryonic component
74
uterus
68
stomach
64
adipose tissue
64
bone element
59
artery
59
mammary gland
51
prostate gland
47
small intestine
45
adrenal gland
44
placenta
41
lymph node
36
penis
33
gonad
33
ureter
29
thymus
28
esophagus
24
spinal cord
19
spleen
17
lymphatic vessel
17
testis
17
vein
16
nerve
15
lymphoid tissue
15
ovary
15
thyroid gland
14
skeleton
13
pituitary gland
12
bronchus
11
bone marrow
11
mouth
8
breast
7
urinary bladder
6
tongue
6
vagina
5
trachea
3
nose
1
pericardium
Project
208
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
159
hg19
58
GRCh38
annotation_type!
Fine-mapped variants
candidate regulatory elements
BIOSAMPLE
TYPE
248 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
chromatin state
eQTL
variant allelic effects
histone modifications
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
6
11
1
3
13
1
1
2
2
2
pancreas
5
5
3
1
1
1
1
body of pancreas
2
5
4
1
1
endocrine pancreas
4
4
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
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