Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
65
accessible chromatin
48
gene expression
44
target gene predictions
33
differential activity
24
candidate regulatory elements
chromatin state
15
eQTL
11
variant allelic effects
6
histone modifications
Fine-mapped variants
5
binding sites
2
sQTL
2
variant to gene
Date released
45
March, 2023
33
May, 2021
31
February, 2021
31
September, 2022
25
February, 2024
20
January, 2021
18
November, 2021
8
August, 2021
7
August, 2018
6
March, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
4
June, 2020
2
February, 2020
2
November, 2019
1
February, 2023
1
January, 2018
1
June, 2021
Available data
155
bed bed3+
73
tsv
57
bigWig
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
Organism
255
Homo sapiens
Biosample type
126
primary cell
95
tissue
31
cell line
3
in vitro differentiated cells
Organ
896
epithelium
575
kidney
406
connective tissue
358
brain
295
musculature of body
255
pancreas
240
lung
230
intestine
224
vasculature
195
heart
191
bodily fluid
187
embryo
185
limb
182
blood
169
skin of body
167
blood vessel
138
large intestine
136
liver
113
extraembryonic component
100
eye
95
stomach
79
uterus
74
bone element
73
adipose tissue
72
mammary gland
65
prostate gland
64
small intestine
61
artery
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
32
spinal cord
28
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
ovary
19
thyroid gland
18
nerve
18
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
11
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
215
AMP
20
T1D
18
ENCODE
2
community
Genome assembly (visualization)
166
hg19
45
GRCh38
annotation_type!
Fine-mapped variants
chromatin state
BIOSAMPLE
TYPE
255 results
search-icon
table-tab-icon
Clear Filters
accessible chromatin
gene expression
target gene predictions
differential activity
candidate regulatory elements
eQTL
variant allelic effects
histone modifications
binding sites
sQTL
variant to gene
primary cell
pancreatic ductal cell
6
3
3
3
1
2
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
pancreatic acinar cell
6
3
3
3
1
pancreatic delta cell
5
3
4
3
1
+ See 12 more…
tissue
islet of Langerhans
6
11
1
13
1
1
2
2
2
pancreas
5
5
5
1
1
1
1
body of pancreas
2
5
8
1
1
endocrine pancreas
4
7
pancreatic ductal cell
2
+ See 6 more…
cell line
EndoC_BH1
8
8
1
3
1
Panc1
2
2
8988T
1
1
HPDE6-E6E7
1
1
pancreatic acinar cell
1
+ See 1 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download