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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
118
target gene predictions
95
candidate regulatory elements
84
accessible chromatin
62
binding sites
57
chromatin state
49
gene expression
35
histone modifications
33
differential activity
17
eQTL
12
variant allelic effects
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
155
September, 2022
129
February, 2021
54
February, 2024
45
March, 2023
39
May, 2021
24
November, 2021
22
October, 2022
20
January, 2021
20
June, 2020
10
August, 2021
7
August, 2018
6
August, 2017
6
March, 2020
6
May, 2020
6
October, 2019
4
January, 2020
4
January, 2022
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
413
bed bed3+
74
tsv
60
bigWig
50
bed bed9
14
bigBed narrowPeak
3
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
566
Homo sapiens
Biosample type
265
cell line
181
primary cell
114
tissue
6
in vitro differentiated cells
Organ
949
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
520
AMP
24
ENCODE
20
T1D
2
community
Genome assembly (visualization)
476
hg19
129
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
566 results
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Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
binding sites
chromatin state
gene expression
histone modifications
differential activity
eQTL
variant allelic effects
sQTL
variant to gene
cell line
K562
23
7
1
2
7
1
MCF-7
6
9
1
3
5
2
EndoC_BH1
1
8
8
3
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
2
1
1
+ See 32 more…
primary cell
pancreatic ductal cell
3
6
1
3
2
3
1
pancreatic beta cell
3
8
3
3
1
pancreatic alpha cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic delta cell
4
5
3
3
1
+ See 19 more…
tissue
islet of Langerhans
1
6
2
3
11
1
13
1
2
2
pancreas
5
5
5
1
3
1
1
1
body of pancreas
5
8
4
2
1
1
endocrine pancreas
4
7
4
blood
2
+ See 9 more…
in vitro differentiated cells
mammary gland epithelial cell
1
1
1
pancreatic ductal cell
3
See all biosamples
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