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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
89
accessible chromatin
72
gene expression
65
target gene predictions
47
candidate regulatory elements
37
differential activity
34
chromatin state
23
eQTL
20
histone modifications
18
binding sites
15
variant allelic effects
Fine-mapped variants
2
sQTL
2
variant to gene
1
caQTL
Date released
90
September, 2022
57
February, 2021
54
February, 2024
49
March, 2023
36
May, 2021
23
November, 2021
20
January, 2021
18
August, 2021
13
March, 2020
9
June, 2020
9
May, 2020
7
August, 2018
7
January, 2020
6
August, 2017
6
October, 2019
5
January, 2022
4
February, 2020
3
November, 2019
2
May, 2022
1
April, 2019
1
February, 2023
1
January, 2018
1
July, 2020
1
June, 2021
1
October, 2022
1
September, 2018
Available data
260
bed bed3+
98
tsv
80
bigWig
27
bed bed9
14
bigBed narrowPeak
6
csv
4
bam
3
bed gappedPeak
3
bigBed bed9
3
xls
Organism
425
Homo sapiens
Biosample type
189
primary cell
164
tissue
62
cell line
10
in vitro differentiated cells
Organ
949
epithelium
652
kidney
452
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
380
AMP
23
ENCODE
20
T1D
2
community
Genome assembly (visualization)
304
hg19
115
GRCh38
2
hg18
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
425 results
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Clear Filters
accessible chromatin
gene expression
target gene predictions
candidate regulatory elements
differential activity
chromatin state
eQTL
histone modifications
binding sites
variant allelic effects
sQTL
variant to gene
caQTL
primary cell
hepatocyte
8
13
3
1
1
4
1
2
pancreatic ductal cell
6
3
3
3
2
1
1
pancreatic beta cell
8
3
3
3
1
pancreatic alpha cell
7
3
3
3
1
endothelial cell of hepatic sinusoid
6
4
6
+ See 17 more…
tissue
liver
4
1
10
13
1
9
7
2
1
1
islet of Langerhans
6
11
1
3
13
1
2
1
2
2
pancreas
5
5
5
3
1
1
1
1
body of pancreas
2
5
8
4
1
1
endocrine pancreas
4
7
4
+ See 8 more…
cell line
EndoC_BH1
8
8
1
3
1
HepG2
2
3
2
2
5
3
HuH-7
1
1
1
1
1
1
Panc1
2
2
1
8988T
1
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
1
hepatocyte(AFP)
3
pancreatic ductal cell
3
See all biosamples
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