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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
256
gene expression
223
accessible chromatin
173
candidate regulatory elements
162
target gene predictions
92
differential activity
87
chromatin state
61
binding sites
42
histone modifications
41
variant allelic effects
7
eQTL
2
caQTL
Date released
263
February, 2021
253
September, 2022
155
September, 2023
129
November, 2021
76
February, 2024
39
May, 2021
38
March, 2023
35
June, 2020
23
August, 2021
20
January, 2021
15
May, 2020
15
November, 2022
14
January, 2020
12
February, 2023
10
October, 2022
9
February, 2020
7
April, 2020
6
August, 2018
6
March, 2020
5
March, 2024
5
October, 2019
4
January, 2022
3
August, 2017
2
May, 2022
1
July, 2020
1
November, 2019
Available data
703
bed bed3+
327
tsv
177
bigWig
84
bed bed9
78
txt
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
1146
Homo sapiens
Biosample type
858
primary cell
157
cell line
101
tissue
30
in vitro differentiated cells
Organ
949
epithelium
652
kidney
454
connective tissue
430
brain
369
musculature of body
311
lung
289
intestine
272
pancreas
257
vasculature
246
heart
235
limb
218
bodily fluid
215
embryo
207
blood
204
skin of body
195
blood vessel
174
large intestine
153
liver
146
extraembryonic component
119
stomach
109
eye
89
bone element
87
mammary gland
84
small intestine
83
adipose tissue
83
uterus
78
prostate gland
73
adrenal gland
73
placenta
69
artery
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
40
spinal cord
34
spleen
26
testis
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
22
nerve
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
833
AMP
155
KPMP
129
ENCODE
20
T1D
7
LungMap
2
community
Genome assembly (visualization)
790
hg19
274
GRCh38
annotation_type!
Fine-mapped variants
BIOSAMPLE
TYPE
1146 results
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Clear Filters
gene expression
accessible chromatin
candidate regulatory elements
target gene predictions
differential activity
chromatin state
binding sites
histone modifications
variant allelic effects
eQTL
caQTL
primary cell
endothelial cell
9
15
7
2
1
2
1
2
hepatocyte
13
8
1
3
1
1
4
2
epithelial cell of proximal tubule
16
1
2
1
1
1
1
glomerular endothelial cell
14
2
2
1
1
1
endothelial cell of umbilical vein
2
6
4
5
2
1
+ See 151 more…
cell line
EndoC_BH1
8
8
1
3
1
22Rv1
4
2
2
1
1
GM23248
1
2
1
1
1
1
LNCaP clone FGC
3
2
2
PC-3
1
2
1
1
1
1
+ See 33 more…
tissue
pigmented layer of retina
20
prostate gland
1
4
2
2
2
2
1
breast epithelium
1
5
3
2
esophagus squamous epithelium
1
6
2
2
lower leg skin
6
2
2
+ See 24 more…
in vitro differentiated cells
retinal pigment epithelial cell
6
hepatocyte
2
1
1
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
iPS DF 4.7 Cell Line
1
1
1
+ See 6 more…
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