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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
accessible chromatin
51
gene expression
47
target gene predictions
35
differential activity
candidate regulatory elements
19
chromatin state
15
eQTL
11
variant allelic effects
7
binding sites
7
histone modifications
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
47
March, 2023
31
September, 2022
25
May, 2021
23
February, 2021
10
February, 2024
10
January, 2021
9
March, 2020
8
August, 2021
8
November, 2021
7
August, 2018
5
September, 2023
4
January, 2022
4
May, 2020
3
August, 2017
2
February, 2020
2
January, 2020
1
April, 2019
1
February, 2023
1
January, 2018
Available data
81
tsv
78
bed bed3+
15
bed bed9
7
bigBed narrowPeak
7
bigWig
3
csv
2
bigBed bed9
Organism
201
Homo sapiens
Biosample type
99
primary cell
74
tissue
24
cell line
4
in vitro differentiated cells
Organ
637
epithelium
443
kidney
313
brain
292
connective tissue
202
musculature of body
188
pancreas
180
vasculature
165
lung
159
bodily fluid
159
heart
155
intestine
152
blood
146
embryo
139
blood vessel
130
limb
116
skin of body
109
liver
95
large intestine
78
extraembryonic component
71
uterus
63
adipose tissue
60
stomach
54
artery
52
mammary gland
49
bone element
46
prostate gland
44
small intestine
40
placenta
38
adrenal gland
33
lymph node
33
penis
32
eye
29
ureter
28
gonad
27
thymus
25
spinal cord
24
esophagus
17
spleen
16
nerve
15
testis
15
vein
13
lymphatic vessel
13
lymphoid tissue
13
ovary
13
pituitary gland
13
thyroid gland
10
mouth
9
bone marrow
9
bronchus
7
breast
6
skeleton
6
urinary bladder
6
vagina
5
tongue
4
trachea
2
nose
1
pericardium
Project
176
AMP
10
T1D
8
ENCODE
5
KPMP
2
community
Genome assembly (visualization)
105
hg19
31
GRCh38
annotation_type!
accessible chromatin
candidate regulatory elements
BIOSAMPLE
TYPE
201 results
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Clear Filters
gene expression
target gene predictions
differential activity
chromatin state
eQTL
variant allelic effects
binding sites
histone modifications
Fine-mapped variants
sQTL
variant to gene
primary cell
pancreatic ductal cell
3
3
3
1
1
2
pancreatic delta cell
3
4
3
1
pancreatic acinar cell
3
3
3
1
pancreatic alpha cell
3
3
3
1
pancreatic beta cell
3
3
3
1
+ See 14 more…
tissue
islet of Langerhans
11
1
3
13
1
2
1
2
2
2
body of pancreas
2
5
4
1
1
3
pancreas
5
3
1
1
1
1
endocrine pancreas
4
4
cell line
EndoC_BH1
8
1
3
1
Panc1
2
1
8988T
1
1
HPDE6-E6E7
1
1
dermis lymphatic vessel endothelial cell
1
1
+ See 2 more…
in vitro differentiated cells
pancreatic ductal cell
3
dermis microvascular lymphatic vessel endothelial cell
1
See all biosamples
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