Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
834
chromatin state
accessible chromatin
285
target gene predictions
126
eQTL
92
histone modifications
72
Fine-mapped variants
9
gene expression
7
caQTL
6
binding sites
Date released
803
September, 2022
194
February, 2024
111
November, 2021
101
January, 2022
84
May, 2021
72
March, 2020
25
February, 2020
9
May, 2019
7
April, 2019
6
January, 2020
5
February, 2023
5
October, 2019
3
August, 2021
3
May, 2020
2
October, 2022
1
November, 2019
Available data
829
bed bed9
395
bed bed3+
106
tsv
31
bigBed bed9
11
bigWig
Organism
1430
Homo sapiens
Biosample type
645
tissue
425
primary cell
361
cell line
in vitro differentiated cells
Organ
131
brain
118
epithelium
83
musculature of body
78
kidney
74
lung
72
embryo
72
heart
70
connective tissue
68
intestine
64
limb
62
vasculature
57
uterus
56
blood vessel
53
bodily fluid
51
blood
42
skin of body
41
liver
40
large intestine
33
extraembryonic component
28
pancreas
28
stomach
22
artery
22
small intestine
19
adipose tissue
19
adrenal gland
17
mammary gland
17
placenta
14
bone element
14
prostate gland
13
spinal cord
13
ureter
12
esophagus
12
gonad
11
thymus
10
eye
10
penis
9
nerve
8
lymph node
7
spleen
6
lymphoid tissue
6
ovary
6
testis
6
thyroid gland
5
mouth
4
vein
3
breast
3
bronchus
3
lymphatic vessel
3
skeleton
3
vagina
2
tongue
2
urinary bladder
1
bone marrow
1
pituitary gland
Project
1318
AMP
111
ENCODE
2
T1D
Genome assembly (visualization)
5734
hg19
1431
GRCh38
4
hg18
annotation_type!
accessible chromatin
biosample_type!
in vitro differentiated cells
BIOSAMPLE
TYPE
1431 results
search-icon
table-tab-icon
Clear Filters
chromatin state
target gene predictions
eQTL
histone modifications
Fine-mapped variants
gene expression
caQTL
binding sites
tissue
heart
21
brain
18
2
stomach
19
1
lung
16
1
kidney
16
+ See 126 more…
primary cell
monocyte
3
84
common myeloid progenitor, CD34-positive
13
endothelial cell of hepatic sinusoid
4
6
hepatocyte
1
1
3
5
pericyte cell
1
9
+ See 155 more…
cell line
HeLa-S3
3
51
H1-hESC
1
37
K562
6
16
HFFc6
19
A549
18
+ See 151 more…
See all biosamples
Download