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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
accessible chromatin
372
target gene predictions
328
candidate regulatory elements
210
histone modifications
197
chromatin state
100
binding sites
76
variant allelic effects
12
gene expression
9
eQTL
5
caQTL
5
hQTL
3
meQTL
2
sQTL
1
other
Date released
482
September, 2022
333
February, 2021
174
May, 2021
111
November, 2021
86
February, 2024
34
May, 2020
29
October, 2022
28
January, 2021
27
May, 2022
6
August, 2017
4
August, 2021
2
January, 2020
2
October, 2019
1
January, 2022
1
March, 2020
Available data
1108
bed bed3+
164
bed bed9
27
bed bed9+
7
bigBed narrowPeak
7
bigWig
4
bigBed bed9
Organism
1320
Homo sapiens
Biosample type
2261
tissue
2147
cell line
1320
primary cell
325
in vitro differentiated cells
4
stem cell
Organ
333
epithelium
173
connective tissue
93
skin of body
93
vasculature
63
blood vessel
41
mammary gland
40
penis
39
kidney
35
pancreas
34
extraembryonic component
32
musculature of body
26
brain
25
lung
23
liver
20
heart
18
embryo
17
artery
17
vein
16
eye
13
bronchus
12
bone element
12
intestine
11
bone marrow
10
prostate gland
9
lymphatic vessel
8
blood
8
bodily fluid
8
esophagus
7
placenta
6
stomach
5
adrenal gland
4
mouth
4
spinal cord
4
trachea
3
large intestine
3
uterus
2
small intestine
2
thyroid gland
1
gonad
1
limb
1
ovary
Project
1181
AMP
111
ENCODE
28
T1D
Genome assembly (visualization)
1320
hg19
425
GRCh38
annotation_type!
accessible chromatin
BIOSAMPLE
TYPE
1320 results
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Clear Filters
target gene predictions
candidate regulatory elements
histone modifications
chromatin state
binding sites
variant allelic effects
gene expression
eQTL
caQTL
hQTL
meQTL
sQTL
other
primary cell
monocyte
2
86
1
1
2
1
common myeloid progenitor, CD34-positive
14
27
13
CD8-positive, alpha-beta T cell
5
7
30
1
B cell
10
14
8
CD4-positive, alpha-beta memory T cell
9
14
9
CD14-positive monocyte
19
8
4
CD8-positive, alpha-beta memory T cell
7
8
7
mononuclear cell
6
7
6
1
foreskin keratinocyte
4
11
4
endothelial cell of umbilical vein
4
6
5
2
trophoblast cell
5
7
1
4
fibroblast of lung
4
6
4
2
endothelial cell
7
1
2
2
1
1
1
foreskin fibroblast
2
6
2
1
4
keratinocyte
5
3
2
3
1
1
natural killer cell
5
6
1
3
CD4-positive, alpha-beta T cell
3
8
3
T cell
4
4
4
2
neutrophil
3
4
2
1
2
1
1
regulatory T cell
4
5
1
3
1
neurosphere
3
7
3
T-helper 1 cell
3
6
3
fibroblast of dermis
4
4
3
1
hepatocyte
3
1
4
1
1
2
mammary epithelial cell
1
3
3
1
4
mammary gland epithelial cell
4
3
3
1
1
pericyte cell
10
1
1
skeletal muscle myoblast
2
4
1
3
2
T-helper 17 cell
3
5
3
T-helper 2 cell
3
5
3
bronchial epithelial cell
2
4
1
2
2
fibroblast
4
1
6
naive thymus-derived CD4-positive, alpha-beta T cell
2
4
1
1
1
1
1
smooth muscle cell
6
2
1
1
1
dermis blood vessel endothelial cell
2
6
2
fibroblast of cardiac tissue
4
3
3
osteoblast
2
2
2
1
3
epithelial cell of prostate
3
4
2
mature neutrophil
1
7
1
naive T cell
3
3
3
astrocyte
4
2
1
1
fibroblast of breast
2
4
2
myoepithelial cell of mammary gland
2
4
2
fibroblast of mammary gland
1
2
1
1
2
fibroblast of pulmonary artery
1
2
1
1
2
fibroblast of villous mesenchyme
1
2
1
1
2
kidney tubule cell
2
3
2
pancreatic ductal cell
3
2
1
1
retinal pigment epithelial cell
1
2
1
1
2
skeletal muscle satellite cell
2
2
2
1
skin fibroblast
3
2
2
CD1c-positive myeloid dendritic cell
1
2
1
1
1
T-cell
2
4
cardiac muscle cell
1
2
1
2
choroid plexus epithelial cell
1
2
1
1
1
dermis lymphatic vessel endothelial cell
2
2
2
endothelial cell of hepatic sinusoid
6
epithelial cell of esophagus
1
2
1
2
epithelial cell of proximal tubule
1
2
1
1
1
erythroblast
2
2
2
foreskin melanocyte
1
4
1
macrophage
3
3
olfactory receptor cell
6
peripheral blood mononuclear cell
4
1
1
pulmonary artery endothelial cell
1
2
1
1
1
CD14-positive, CD16-negative classical monocyte
5
alternatively activated macrophage
1
4
astrocyte of the cerebellum
1
2
1
1
astrocyte of the hippocampus
1
2
1
1
glomerular endothelial cell
1
2
1
1
kidney epithelial cell
1
2
1
1
luminal epithelial cell of mammary gland
3
1
1
lung microvascular endothelial cell
1
3
1
mesenchymal stem cell
1
1
1
1
1
pancreatic delta cell
4
1
renal cortical epithelial cell
1
2
1
1
skeletal muscle cell
1
2
1
1
smooth muscle cell of the brain vasculature
1
2
1
1
astrocyte of the spinal cord
1
2
1
brain microvascular endothelial cell
1
2
1
cardiac fibroblast
3
1
fibroblast of gingiva
1
2
1
fibroblast of peridontal ligament
1
2
1
fibroblast of the aortic adventitia
1
2
1
fibroblast of the conjunctiva
1
2
1
glomerular visceral epithelial cell
1
2
1
hepatic stellate cell
1
1
1
1
inflammatory macrophage
1
3
iris pigment epithelial cell
1
2
1
kidney glomerular epithelial cell
1
2
1
mast cell
1
1
1
1
myofibroblast cell
1
3
non-pigmented ciliary epithelial cell
1
2
1
pancreatic acinar cell
3
1
pancreatic alpha cell
3
1
pancreatic beta cell
3
1
skeletal muscle fiber
2
2
stromal cell of bone marrow
1
2
1
tracheal epithelial cell
2
2
type I muscle cell
1
1
1
1
type II muscle cell
1
1
1
1
amnion mesenchymal stem cell
1
1
1
amniotic stem cell
1
1
1
aortic adventitial fibroblast
1
2
basal cell
1
2
colon epithelial cell
3
cortical cell of adrenal gland
2
1
enterocyte
3
epidermal melanocyte
1
1
1
epithelial cell of amnion
1
1
1
kidney capillary endothelial cell
1
1
1
mammary stem cell
1
1
1
mononuclear cell of bone marrow
1
2
myotube
1
2
pancreatic A cell
3
plasma cell
1
1
1
pre-B acute lymphoblastic leukemia cell
2
1
preadipocyte
2
1
regular cardiac myocyte
1
1
1
renal epithelial cell
1
2
type B pancreatic cell
3
type II pneumocyte
2
1
cardiac fibroblast
2
Adipose stromal cell
1
1
CD34-positive, CD38-negative hematopoietic stem cell
1
1
CD4-positive helper T cell
2
Ishikawa
1
1
Rhabdoid Tumor of the Kidney
1
1
Schwann cell
2
Th1 cell
1
1
Th17 cell
1
1
activated CD4-positive, alpha-beta T cell
2
acute myeloid leukemia cell
2
adipocyte
1
1
aortic endothelial cell
1
1
blood vessel smooth muscle cell
2
brain pericyte
1
1
cardiac muscle myoblast
1
1
chronic lymphocytic leukemia cell
1
1
columnar chondrocyte
1
1
dermis microvascular lymphatic vessel endothelial cell
2
enteric smooth muscle cell
2
erythroid cell
1
1
erythroid progenitor cell
1
1
gabaergic neuron
2
glutamatergic neuron
2
goblet cell
2
head and neck squamous cell carcinoma
1
1
leukemic stem cell
1
1
mantle cell lymphoma cell
2
megakaryocyte
2
memory B cell
2
meso-epithelial cell
1
1
mesothelial cell
1
1
naive B cell
2
naive t cell
1
1
naive thymus-derived CD8-positive, alpha-beta T cell
2
neoplastic cell
1
1
neuronal stem cell
1
1
pancreatic endocrine cell
1
1
pancreatic polypeptide-secreting cell
1
1
parietal cell
1
1
peptic cell
1
1
peripheral blood stem cell
1
1
peripheral blood-derived erythroblast
2
prostate gland cancer cell
1
1
pulmonary interstitial fibroblast
1
1
renal proximal tubule cell
1
1
small cell ovarian carcinoma cell
1
1
smooth muscle cell of the esophagus
2
somatic muscle myotube
1
1
thyroid follicular cell
1
1
vascular associated smooth muscle cell
2
brain microvascular endothelial cell
1
retinal pigment epithelial cell
1
B cell, CD19-positive
1
B-cell lymphoma cell
1
B-lymphocyte
1
CD34-PB
1
CD34-negative, CD41-positive, CD42-positive megakaryocyte cell
1
CD34-positive, CD38-positive common myeloid progenitor OR CD34-positive, CD38-positive common lymphoid progenitor
1
CD4-positive, CD25-positive, alpha-beta regulatory T cell
1
CD56-positive, CD161-positive immature natural killer cell
1
Heart fetal (cardiac muscle cell)
1
Liver fetal (hepatocyte)
1
Satellite Cells, Skeletal Muscle
1
Stromal Predominant Kidney Wilms Tumor
1
T-cell lymphoma cell
1
Th2 cell
1
activated CD8-positive, alpha-beta T cell
1
acute myeloid leukemia
1
adult endothelial progenitor cell
1
alveolar cell type II
1
alveolar macrophage
1
amniotic epithelial cell
1
aortic smooth muscle cell
1
basal cell of epidermis
1
bone cell
1
bone marrow cell
1
bronchial goblet cell
1
cardiac endothelial cell
1
cell
1
ciliated cell
1
club cell
1
colon goblet cell
1
colorectal cancer
1
conventional dendritic cell
1
eccrine cell
1
effector memory CD4-positive, alpha-beta T cell
1
endocardial cell
1
endothelial cell of coronary artery
1
endothelial cell of lymphatic vessel
1
enteric neuron
1
enterochromaffin-like cell
1
enterocyte of epithelium of small intestine
1
fat cell
1
fibroblast of arm
1
fibroblast of skin of abdomen
1
fibroblast of skin of back
1
fibroblast of skin of right quadriceps
1
foveolar cell of stomach
1
glial cell
1
granular cell of epidermis
1
granulocyte
1
granulosa cell
1
head and neck neoplasia
1
induced T-regulatory cell
1
intestinal epithelial cell
1
intestinal tuft cell
1
leukocyte
1
luminal epithelial cell of prostatic duct
1
luteal cell
1
lymphocyte of B lineage
1
mature NK T cell
1
mature eosinophil
1
megakaryocyte-erythroid progenitor cell
1
melanocyte
1
meningioma cell
1
microglial cell
1
mycosis fungoides
1
myeloid leukocyte
1
myoepithelial cell
1
natural killer cell mediated cytotoxicity
1
neural cell
1
neural progenitor cell
1
neutrophil progenitor cell
1
non keratinizing barrier epithelial cell
1
non-classical monocyte
1
oligodendrocyte
1
oligodendrocyte precursor cell
1
pancreatic stellate cell
1
paneth cell
1
peripheral blood
1
plasmacytoid dendritic cell
1
primordial germ cell
1
progenitor cell
1
regular atrial cardiac myocyte
1
respiratory goblet cell
1
schwann cell
1
seminoma cell
1
skeletal muscle fibroblast
1
small intestine goblet cell
1
smooth muscle cell of the coronary artery
1
sperm
1
stellate neuron
1
stomach neuroendocrine cell
1
stromal cell
1
type I cell of adrenal cortex
1
type I pneumocyte
1
type II cell of adrenal cortex
1
umbilical vein endothelial cell
1
undifferentiated pleomorphic sarcoma
1
urinary bladder cancer cell
1
uterine smooth muscle cell
1
ventricular cardiac muscle cell
1
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