Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
638
binding sites
581
histone modifications
391
target gene predictions
317
candidate regulatory elements
187
chromatin state
accessible chromatin
21
gene expression
10
differential activity
10
eQTL
4
variant allelic effects
Date released
1289
February, 2021
530
September, 2022
166
February, 2024
69
October, 2022
54
May, 2021
10
January, 2022
9
August, 2021
9
March, 2023
7
March, 2020
7
May, 2022
5
August, 2017
2
May, 2020
1
February, 2023
1
March, 2024
Available data
1936
bed bed3+
175
bed bed9
22
tsv
7
bed bed9+
Organism
2159
Homo sapiens
Biosample type
2324
tissue
2159
cell line
1977
primary cell
401
in vitro differentiated cells
4
stem cell
Organ
194
bodily fluid
184
blood
121
embryo
92
lung
68
brain
68
skin of body
65
uterus
54
lymph node
49
prostate gland
48
bone element
36
kidney
35
mammary gland
31
epithelium
30
intestine
large intestine
26
pancreas
25
connective tissue
25
liver
15
musculature of body
15
penis
10
pituitary gland
9
vasculature
8
eye
6
gonad
6
heart
6
limb
6
testis
5
blood vessel
5
lymphoid tissue
4
mouth
3
artery
3
extraembryonic component
3
placenta
2
adipose tissue
2
lymphatic vessel
2
spinal cord
2
vein
Project
2150
AMP
9
community
Genome assembly (visualization)
2117
hg19
355
GRCh38
1
hg18
annotation_type!
accessible chromatin
files.file_type!
bigBed narrowPeak
organ_slims!
large intestine
BIOSAMPLE
TYPE
2159 results
search-icon
table-tab-icon
Clear Filters
binding sites
histone modifications
target gene predictions
candidate regulatory elements
chromatin state
gene expression
differential activity
eQTL
variant allelic effects
cell line
HeLa-S3
1
55
5
3
A549
2
1
19
21
18
H1-hESC
2
1
39
1
1
8
K562
2
1
23
7
7
MCF-7
3
2
6
9
5
+ See 742 more…
See all biosamples
Download